About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_023306-T1
OS493_023307-T1DNA METHYLTRANSFERASE 1-ASSOCIATED PROTEIN 1 FAMILY MEMBER
OS493_023308-T1
OS493_023309-T1
OS493_023310-T1
OS493_023311-T1
OS493_023312-T1
OS493_023313-T1
OS493_023314-T1
OS493_023315-T1
OS493_023317-T1-
OS493_023318-T1PROTEIN SIDEKICK
OS493_023319-T1PROTEIN SIDEKICK
OS493_023320-T1
OS493_023321-T1
OS493_023322-T1
OS493_023323-T1
OS493_023325-T1
OS493_023326-T1
OS493_023328-T1
OS493_023329-T1
OS493_023330-T1
OS493_023331-T1HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_023336-T1TUMOR NECROSIS FACTOR RECEPTOR
OS493_023337-T1SULFOTRANSFERASE SULT
OS493_023338-T1THIOREDOXIN DOMAIN-CONTAINING PROTEIN 16
OS493_023339-T1THIOREDOXIN DOMAIN-CONTAINING PROTEIN 16
OS493_023340-T1PHOSPHOTYROSINE INTERACTION DOMAIN-CONTAINING FAMILY MEMBER
OS493_023341-T1ELONGATION FACTOR G, MITOCHONDRIAL
OS493_023342-T1THIOPURINE S-METHYLTRANSFERASE
OS493_023343-T1ELONGATION FACTOR G, MITOCHONDRIAL
OS493_023344-T1
OS493_023345-T1
OS493_023348-T1DNA POLYMERASE DELTA SUBUNIT 3
OS493_023349-T1
OS493_023350-T1
OS493_023351-T1
OS493_023352-T1
OS493_023353-T1
OS493_023354-T1ETS
OS493_023355-T1ETS
OS493_023356-T1ETS
OS493_023357-T1
OS493_023358-T1ZINC FINGER AND SCAN DOMAIN-CONTAINING
OS493_023359-T1
OS493_023360-T1
OS493_023361-T1
OS493_023362-T1ATP-BINDING CASSETTE SUB-FAMILY C
OS493_023363-T1ATP-BINDING CASSETTE SUB-FAMILY C
OS493_023364-T1ATP-BINDING CASSETTE SUB-FAMILY C
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