About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_023365-T1
OS493_023366-T1ATP-BINDING CASSETTE SUB-FAMILY C
OS493_023368-T1ATP-BINDING CASSETTE SUB-FAMILY C
OS493_023369-T1ATP-BINDING CASSETTE SUB-FAMILY C
OS493_023370-T1
OS493_023371-T1LD33804P
OS493_023372-T1
OS493_023373-T1ATP-BINDING CASSETTE SUB-FAMILY C
OS493_023374-T1ATP-BINDING CASSETTE SUB-FAMILY C
OS493_023375-T1
OS493_023376-T1ATP-BINDING CASSETTE SUB-FAMILY C
OS493_023377-T1ATP-BINDING CASSETTE SUB-FAMILY C
OS493_023378-T1
OS493_023379-T1
OS493_023380-T1ATP-BINDING CASSETTE SUB-FAMILY C
OS493_023381-T1
OS493_023382-T1
OS493_023383-T1
OS493_023384-T1
OS493_023385-T1METHYLTRANSFERASE
OS493_023386-T1METHYLTRANSFERASE
OS493_023387-T1METHYLTRANSFERASE
OS493_023388-T1METHYLTRANSFERASE
OS493_023389-T1
OS493_023390-T1SODIUM/POTASSIUM-TRANSPORTING ATPASE SUBUNIT ALPHA
OS493_023391-T1SODIUM/POTASSIUM-TRANSPORTING ATPASE SUBUNIT ALPHA
OS493_023392-T1SODIUM/POTASSIUM-TRANSPORTING ATPASE SUBUNIT ALPHA
OS493_023393-T1TEKTIN
OS493_023394-T1
OS493_023395-T1
OS493_023396-T1
OS493_023397-T1
OS493_023398-T1
OS493_023399-T1EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED
OS493_023401-T1MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
OS493_023402-T1ATP-BINDING CASSETTE SUB-FAMILY C
OS493_023403-T1
OS493_023404-T1SODIUM/HYDROGEN EXCHANGER
OS493_023405-T1
OS493_023406-T1
OS493_023407-T1TRANSMEMBRANE PROTEIN 254
OS493_023408-T1
OS493_023409-T1
OS493_023410-T1
OS493_023413-T1SIALIC ACID BINDING IMMUNOGLOBULIN-LIKE LECTIN
OS493_023414-T1ENDOGLIN/TGF-BETA RECEPTOR TYPE III
OS493_023416-T1
OS493_023417-T1
OS493_023418-T1
OS493_023419-T1CELL DIVISION PROTEIN KINASE
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