About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS21251PROTEIN ARGININE N-METHYLTRANSFERASE
HS21252ORGANIC SOLUTE TRANSPORTER-RELATED
HS21253G_PROTEIN_RECEP_F1_2 DOMAIN-CONTAINING PROTEIN
HS21254POU DOMAIN
HS21255SMALL NUCLEAR RIBONUCLEOPROTEIN F SNRNP-F
HS21256ZINC FINGER PROTEIN
HS21257ZINC FINGER PROTEIN
HS21258METHYLMALONYL-COA MUTASE
HS21259PA14 DOMAIN-CONTAINING PROTEIN
HS21260HEDGEHOG-INTERACTING PROTEIN
HS21261
HS21262MATRIX PROTEIN, PUTATIVE-RELATED
HS21263CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED
HS21264REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS21265UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
HS21266GRB2-ASSOCIATED-BINDING PROTEIN
HS21267AGAP000124-PA
HS21268ZINC FINGER PROTEIN 330
HS21269E3 UBIQUITIN-PROTEIN LIGASE ATL42
HS21270PROTEIN VASCULAR ASSOCIATED DEATH 1, CHLOROPLASTIC
HS21271MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED
HS21272ENGULFMENT AND CELL MOTILITY
HS21273UNCHARACTERIZED
HS21274OVOCHYMASE-RELATED
HS21275FAM13
HS21276UBIQUITIN-PROTEIN LIGASE E3A-RELATED
HS21277FERRITIN
HS21278SI:CH211-196P9.1-RELATED
HS21279N-ACETYLGALACTOSAMINYLTRANSFERASE
HS21280UNCHARACTERIZED
HS21281TRANSMEMBRANE PROTEIN 187
HS21282OPSIN
HS21283NADH DEHYDROGENASE UBIQUINONE IRON-SULFUR PROTEIN 8, MITOCHONDRIAL
HS21284TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1
HS21285
HS21286FIBRINOGEN/TENASCIN/ANGIOPOEITIN
HS21287HMG DOMAIN-CONTAINING PROTEIN 3
HS21288TOUCAN, ISOFORM A
HS21289MYOTUBULARIN-RELATED
HS21290WD REPEAT-CONTAINING PROTEIN 17
HS21291TRANSPOSABLE ELEMENT-RELATED
HS21292ALKALINE CERAMIDASE
HS2129340S RIBOSOMAL PROTEIN S6
HS21294PERILIPIN
HS21295UNCHARACTERIZED
HS21296CARNITINE O-ACYLTRANSFERASE
HS21297
HS21298MAP/MICROTUBULE AFFINITY-REGULATING KINASE
HS21299SOMATOTROPIN,PROLACTIN
HS21300AGAP008228-PA
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