About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS21351INORGANIC PYROPHOSPHATASE
HS21352UNCHARACTERIZED
HS21353ZINC FINGER-CONTAINING
HS21354TRANSPOSON TY3-I GAG-POL POLYPROTEIN
HS21355ANK_REP_REGION DOMAIN-CONTAINING PROTEIN
HS21356S-METHYL-5'-THIOADENOSINE PHOSPHORYLASE
HS21357E3 UBIQUITIN-PROTEIN LIGASE TOPORS
HS21358NADH DEHYDROGENASE [UBIQUINONE] 1 BETA SUBCOMPLEX SUBUNIT 6
HS21359MSF1/PX19 RELATED
HS21360
HS21361MAX DIMERIZATION, MAD
HS21362REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS21363VESICULAR, OVEREXPRESSED IN CANCER, PROSURVIVAL PROTEIN 1
HS21364PROGRAMMED CELL DEATH 4
HS21365MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE
HS21366KRUEPPEL-LIKE TRANSCRIPTION FACTOR
HS21367ZINC FINGER PROTEIN
HS21368FLAVIN MONOAMINE OXIDASE
HS21369E3 UBIQUITIN-PROTEIN LIGASE ATL42
HS21370UNCHARACTERIZED
HS21371LIPOXYGENASE
HS21372BETA-GALACTOSIDASE RELATED
HS21373CLAUDIN DOMAIN-CONTAINING PROTEIN 1
HS21374ASPARTOACYLASE
HS21375G-PROTEIN COUPLED RECEPTOR TKR-1-RELATED
HS21376ADP-RIBOSYLTRANSFERASE
HS21377DNA-DIRECTED PRIMASE / POLYMERASE PROTEIN
HS21378LONG-CHAIN-FATTY-ACID--COA LIGASE
HS21379SI:CH211-196P9.1-RELATED
HS21380ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED
HS21381UNCHARACTERIZED
HS21382UFM1-SPECIFIC PROTEASE 2
HS21383GUANYLATE CYCLASE SOLUBLE SUBUNIT BETA-2
HS21384GUANYLATE CYCLASE SOLUBLE SUBUNIT BETA-2
HS21385FATTY ACID BINDING PROTEIN
HS21386
HS21387UBIQUITIN SPECIFIC PROTEINASE
HS21388MYOZENIN
HS21389PUTATIVE-RELATED
HS21390BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
HS2139126S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 5-RELATED
HS21392SOLUTE CARRIER FAMILY 22 MEMBER
HS21393SOLUTE CARRIER FAMILY 22 MEMBER
HS21394ATP-DEPENDENT RNA HELICASE
HS21395SUPEROXIDE DISMUTASE CU-ZN -RELATED
HS21396UNCHARACTERIZED
HS21397LEUCINE-RICH REPEAT-CONTAINING PROTEIN
HS21398CARDIAC-ENRICHED FHL2-INTERACTING PROTEIN-RELATED
HS21399MICROSOMAL TRIGLYCERIDE TRANSFER PROTEIN, LARGE SUBUNIT
HS21400TETRASPANIN
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