About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS21501
HS21502ZINC FINGER PROTEIN
HS21503HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN
HS21504UNCHARACTERIZED
HS21505
HS21506AMYLOID BETA A4 PRECURSOR PROTEIN-BINDING FAMILY B
HS21507INTERLEUKIN-1 RECEPTOR-ASSOCIATED KINASE
HS21508PROTEIN TAG-278-RELATED
HS21509PROTEIN TAG-278-RELATED
HS21510CONDENSIN COMPLEX SUBUNIT 3-RELATED
HS21511TRANSCRIPTION FACTOR MLR1/2
HS21512TRANSPOSON
HS21513SLIT HOMOLOG
HS21514ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
HS21515SET DOMAIN-CONTAINING PROTEIN-RELATED
HS21516GTPASE, IMAP FAMILY MEMBER-RELATED
HS21517NEUROTRANSMITTER GATED ION CHANNEL
HS21518
HS21519RHO FAMILY GTPASE
HS21520NEDD4-BINDING PROTEIN 2
HS21521ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED
HS21522UBIQUITIN-CONJUGATING ENZYME E2
HS21523UNCHARACTERIZED
HS21524MICROTUBULE-ASSOCIATED PROTEIN 9
HS21525UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE
HS21526LIPOYL SYNTHASE
HS2152760S/50S RIBOSOMAL PROTEIN L6/L9
HS21528CHROMOSOME TRANSMISSION FIDELITY FACTOR 18
HS21529OSMOTIC AVOIDANCE ABNORMAL PROTEIN 1/WD REPEAT MEMBRANE PROTEIN
HS21530KELCH PROTEIN
HS21531
HS21532FI01459P
HS21533KRUEPPEL-LIKE TRANSCRIPTION FACTOR
HS21534RAB GTPASE-ACTIVATING PROTEIN 1-LIKE
HS21535PHOSPHOMANNOMUTASE 45A
HS21536ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7
HS21537PAIRED BOX PROTEIN PAX-6-RELATED-RELATED
HS21538MAP/MICROTUBULE AFFINITY-REGULATING KINASE
HS21539D-2-HYDROXYGLUTARATE DEHYDROGENASE, MITOCHONDRIAL
HS21540RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
HS21541DNA POLYMERASE I
HS21542UBIQUITIN-ACTIVATING ENZYME E1
HS215432-HYDROXYACID DEHYDROGENASE-RELATED
HS21544ZINC FINGER PROTEIN
HS21545DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA49
HS21546F-BOX ONLY PROTEIN
HS21547SMALL INDUCIBLE CYTOKINE A
HS21548SERINE/THREONINE-PROTEIN KINASE
HS21549ANKYRIN REPEAT-CONTAINING
HS21550ANKYRIN DOMAIN-CONTAINING
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