About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS21651TRINUCLEOTIDE REPEAT-CONTAINING GENE 6
HS21652CD7
HS21653ZINC FINGER PROTEIN 207
HS21654T-LYMPHOCYTE ACTIVATION ANTIGEN
HS21655GEO05313P1
HS21656SERINE/THREONINE-PROTEIN KINASE PIM
HS21657SMALL UBIQUITIN-RELATED MODIFIER
HS21658GOLGI-LOCALIZED, GAMMA-ADAPTIN EAR CONTAINING, ARF BINDING PROTEIN
HS21659NEUROPEPTIDES RECEPTOR
HS21660UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
HS21661WD-40 REPEAT PROTEIN
HS21662ZINC FINGER PROTEIN
HS21663SYNTAXIN
HS21664NETRIN/LAMININ-RELATED
HS21665PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY SUBUNIT
HS21666PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY SUBUNIT
HS21667UNCHARACTERIZED
HS21668HTH CENPB-TYPE DOMAIN-CONTAINING PROTEIN
HS21669RIBOSE-PHOSPHATE DIPHOSPHOKINASE FAMILY MEMBER
HS21670MIP08469P
HS21671
HS21672ALPHA-MANNOSIDE BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE
HS21673ALPHA-MANNOSIDE BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE
HS21674CONNECTIVE TISSUE GROWTH FACTOR-RELATED
HS21675ATP-DEPENDENT RNA HELICASE DBP3
HS21676RAB GTPASE-ACTIVATING PROTEIN 1-LIKE
HS21677ZINC FINGER PROTEIN
HS21678LYSOZYME G FAMILY MEMBER
HS21679LYSOZYME G FAMILY MEMBER
HS21680PEPTIDOGLYCAN RECOGNITION PROTEIN
HS21681MUCOLIPIN
HS21682UNCHARACTERIZED
HS21683UPF0575 PROTEIN C19ORF67
HS21684SERINE/THREONINE-PROTEIN KINASE
HS21685MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5
HS21686MYOSIN HEAVY CHAIN, NON-MUSCLE
HS21687MITOCHONDRIAL GLYCINE TRANSPORTER
HS21688
HS21689UNCHARACTERIZED
HS21690CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS
HS21691VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUM
HS21692MYOSIN HEAVY CHAIN, NON-MUSCLE
HS21693CYTOGLOBIN
HS21694SPHINGOSINE KINASE
HS21695(E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME
HS21696SEROTONIN N-ACETYLTRANSFERASE
HS21697INACTIVE RHOMBOID PROTEIN
HS21698ELECTRON TRANSPORT OXIDOREDUCTASE
HS21699CST COMPLEX SUBUNIT TEN1
HS21700ENVOPLAKIN
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