About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS21601CENTROMERE PROTEIN M
HS21602RNA-BINDING PROTEIN LUC7-RELATED
HS21603ESSENTIAL MCU REGULATOR, MITOCHONDRIAL
HS21604
HS21605PLECKSTRIN HOMOLOGY PH DOMAIN-CONTAINING PROTEIN
HS21606
HS21607INWARD RECTIFIER POTASSIUM CHANNEL
HS21608SOX100B
HS21609RIBONUCLEASE H2 SUBUNIT A
HS21610SERINE/THREONINE-PROTEIN KINASE
HS21611CYSTEINE PROTEASE ATG4
HS21612SNF2/RAD54 HELICASE FAMILY
HS21613LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED
HS21614AP COMPLEX SUBUNIT MU
HS21615ANK_REP_REGION DOMAIN-CONTAINING PROTEIN
HS21616-
HS21617LD33804P
HS21618G-PROTEIN COUPLED RECEPTOR
HS21619FERREDOXIN/ADRENODOXIN
HS21620GATA-TYPE ZINC FINGER PROTEIN 1
HS21621FORKHEAD BOX PROTEIN
HS21622HEME OXYGENASE
HS21623T-CELL ACUTE LYMPHOCYTIC LEUKEMIA/STEM CELL LEUKEMIA-RELATED
HS21624GTPASE, IMAP FAMILY MEMBER-RELATED
HS21625HMG DOMAIN-CONTAINING PROTEIN 4
HS21626GEO07743P1
HS21627NUCLEAR FACTOR I
HS21628DAN DOMAIN FAMILY MEMBER 5
HS21629TETRASPANIN
HS21630LD44762P
HS21631CARDIOLIPIN HYDROLASE
HS21632UNCHARACTERIZED
HS21633LIPID PHOSPHATE PHOSPHATASE
HS21634PARALEMMIN-3
HS21635MITOTIC INTERACTOR AND SUBSTRATE OF PLK1 MISP FAMILY MEMBER
HS21636PROTEIN HIDE1
HS21637RAB11-FAMILY INTERACTING PROTEIN
HS21638TRANSPOSON TY3-I GAG-POL POLYPROTEIN
HS21639
HS21640HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN 66
HS21641POLYCOMB GROUP PROTEIN
HS21642CHROMOSOME TRANSMISSION FIDELITY FACTOR 18
HS21643UNCHARACTERIZED
HS21644FI20236P1
HS21645ARF-GAP WITH DUAL PH DOMAIN-CONTAINING PROTEIN 1-LIKE PROTEIN
HS21646RHO FAMILY GTPASE
HS21647RHOMBOID-RELATED PROTEIN
HS21648TRANSPOSON TY3-I GAG-POL POLYPROTEIN
HS21649SEPTIN
HS21650TRINUCLEOTIDE REPEAT-CONTAINING GENE 6
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