The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Pseudoliparis swirei | Chordata | hadal snailfish | Deep sea | 7,254 | the Mariana Trench (142°26′E, 11°07′N) | 2059687 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
NWPU_hadal_v1 | 626.4Mb | Chromosome | 2023 | JANBZZ01 | Northwestern Polytechnical University | PRJNA852951 | 96.00% | 21,161 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebrates | Elife | 38134226 |
Gene ID | Description |
---|---|
HS21601 | CENTROMERE PROTEIN M |
HS21602 | RNA-BINDING PROTEIN LUC7-RELATED |
HS21603 | ESSENTIAL MCU REGULATOR, MITOCHONDRIAL |
HS21604 | |
HS21605 | PLECKSTRIN HOMOLOGY PH DOMAIN-CONTAINING PROTEIN |
HS21606 | |
HS21607 | INWARD RECTIFIER POTASSIUM CHANNEL |
HS21608 | SOX100B |
HS21609 | RIBONUCLEASE H2 SUBUNIT A |
HS21610 | SERINE/THREONINE-PROTEIN KINASE |
HS21611 | CYSTEINE PROTEASE ATG4 |
HS21612 | SNF2/RAD54 HELICASE FAMILY |
HS21613 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED |
HS21614 | AP COMPLEX SUBUNIT MU |
HS21615 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
HS21616 | - |
HS21617 | LD33804P |
HS21618 | G-PROTEIN COUPLED RECEPTOR |
HS21619 | FERREDOXIN/ADRENODOXIN |
HS21620 | GATA-TYPE ZINC FINGER PROTEIN 1 |
HS21621 | FORKHEAD BOX PROTEIN |
HS21622 | HEME OXYGENASE |
HS21623 | T-CELL ACUTE LYMPHOCYTIC LEUKEMIA/STEM CELL LEUKEMIA-RELATED |
HS21624 | GTPASE, IMAP FAMILY MEMBER-RELATED |
HS21625 | HMG DOMAIN-CONTAINING PROTEIN 4 |
HS21626 | GEO07743P1 |
HS21627 | NUCLEAR FACTOR I |
HS21628 | DAN DOMAIN FAMILY MEMBER 5 |
HS21629 | TETRASPANIN |
HS21630 | LD44762P |
HS21631 | CARDIOLIPIN HYDROLASE |
HS21632 | UNCHARACTERIZED |
HS21633 | LIPID PHOSPHATE PHOSPHATASE |
HS21634 | PARALEMMIN-3 |
HS21635 | MITOTIC INTERACTOR AND SUBSTRATE OF PLK1 MISP FAMILY MEMBER |
HS21636 | PROTEIN HIDE1 |
HS21637 | RAB11-FAMILY INTERACTING PROTEIN |
HS21638 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
HS21639 | |
HS21640 | HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN 66 |
HS21641 | POLYCOMB GROUP PROTEIN |
HS21642 | CHROMOSOME TRANSMISSION FIDELITY FACTOR 18 |
HS21643 | UNCHARACTERIZED |
HS21644 | FI20236P1 |
HS21645 | ARF-GAP WITH DUAL PH DOMAIN-CONTAINING PROTEIN 1-LIKE PROTEIN |
HS21646 | RHO FAMILY GTPASE |
HS21647 | RHOMBOID-RELATED PROTEIN |
HS21648 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
HS21649 | SEPTIN |
HS21650 | TRINUCLEOTIDE REPEAT-CONTAINING GENE 6 |