About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

<< First 418 419 420 421 422 423 424 425 426 427 Forward> Last>>        450 pages in total

Gene IDDescription
HS211512-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2
HS21152B-BOX DOMAIN CONTAINING
HS21153MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B
HS21154
HS21155ACTIN
HS21156
HS21157
HS21158PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
HS21159UBIQUITIN-LIKE PROTEIN 5
HS21160PROTEIN VAV
HS21161BREAST CANCER ANTI-ESTROGEN RESISTANCE PROTEIN 3 HOMOLOG-LIKE PROTEIN
HS21162FCH AND DOUBLE SH3 DOMAINS PROTEIN
HS21163FIBRINOGEN/TENASCIN/ANGIOPOEITIN
HS21164OLFACTOMEDIN-RELATED
HS21165COLLAGEN ALPHA
HS21166RETINOL DEHYDROGENASE-RELATED
HS21167PARTNER AND LOCALIZER OF BRCA2
HS21168SERINE/THREONINE-PROTEIN KINASE PLK
HS21169FASCIN
HS21170UNCHARACTERIZED
HS21171TWEETY-RELATED
HS21172FRINGE-RELATED
HS21173NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
HS21174MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD1 MITOTIC ARREST DEFICIENT-LIKE PROTEIN 1
HS21175ANTIGEN BSP, PUTATIVE-RELATED
HS21176POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1
HS21177RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED
HS211783'-5' EXONUCLEASE ERI1-RELATED
HS21179THUMP DOMAIN CONTAINING PROTEIN 1-RELATED
HS21180AXIN
HS21181GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 1
HS21182INTERCELLULAR ADHESION MOLECULE
HS21183RETINOBLASTOMA-BINDING PROTEIN 6
HS21184
HS21185VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUM
HS21186VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUM
HS21187SYNAPTOGYRIN
HS21188PROTEIN DISULFIDE ISOMERASE
HS21189LIPOPOLYSACCHARIDE-INDUCED TUMOR NECROSIS FACTOR-ALPHA FACTOR
HS21190PROTEIN DISULFIDE ISOMERASE
HS21191
HS21192RW1 PROTEIN HOMOLOG
HS21193MEIOTIC NUCLEAR DIVISION PROTEIN 1 HOMOLOG
HS21194E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED
HS21195INVERTED FORMIN-2
HS21196ARFAPTIN-RELATED
HS21197AGAP004327-PA
HS21198TNFAIP3-INTERACTING PROTEIN COILED COIL FAMILY MEMBER
HS21199FRIZZLED
HS21200CADHERIN-23
TOP