The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Pseudoliparis swirei | Chordata | hadal snailfish | Deep sea | 7,254 | the Mariana Trench (142°26′E, 11°07′N) | 2059687 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
NWPU_hadal_v1 | 626.4Mb | Chromosome | 2023 | JANBZZ01 | Northwestern Polytechnical University | PRJNA852951 | 96.00% | 21,161 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebrates | Elife | 38134226 |
Gene ID | Description |
---|---|
HS20951 | |
HS20952 | PLATELET-DERIVED GROWTH FACTOR |
HS20953 | SAD1/UNC-84-LIKE PROTEIN-RELATED |
HS20954 | |
HS20955 | |
HS20956 | HIT FAMILY PROTEIN 1 |
HS20957 | ACTIVATING TRANSCRIPTION FACTOR ATF 4/5 |
HS20958 | ACTIVE REGULATOR OF SIRT1 |
HS20959 | THIOSULFATE SULFERTANSFERASE |
HS20960 | CYTOKINE RECEPTOR |
HS20961 | |
HS20962 | BETA-1,4-MANNOSYL-GLYCOPROTEIN BETA-1,4-N-ACETYLGLUCOSAMINYL-TRANSFERASE |
HS20963 | PROTEIN PHOSPHATASE 2C |
HS20964 | SYNAPTOGYRIN |
HS20965 | DRAB11-RELATED |
HS20966 | DIVALENT CATION TOLERANCE CUTA-RELATED |
HS20967 | RHO FAMILY GTPASE |
HS20968 | GUANYL-NUCLEOTIDE EXCHANGE FACTOR |
HS20969 | UNCHARACTERIZED |
HS20970 | ARF-GAP WITH DUAL PH DOMAIN-CONTAINING PROTEIN 1-LIKE PROTEIN |
HS20971 | ENDONUCLEASE |
HS20972 | PROTEIN CBG26694 |
HS20973 | RETROVIRUS-RELATED POL POLYPROTEIN FROM TRANSPOSON 412-LIKE PROTEIN-RELATED |
HS20974 | GALECTIN |
HS20975 | ELONGATION FACTOR TU-RELATED |
HS20976 | PROTEIN CBG11839-RELATED |
HS20977 | ANTIGEN BSP, PUTATIVE-RELATED |
HS20978 | FRINGE-RELATED |
HS20979 | B-BOX DOMAIN CONTAINING |
HS20980 | ALPHA-MANNOSIDASE |
HS20981 | N 2 ,N 2 -DIMETHYLGUANOSINE TRNA METHYLTRANSFERASE |
HS20982 | AGAP004733-PA |
HS20983 | |
HS20984 | |
HS20985 | |
HS20986 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
HS20987 | IMMEDIATE EARLY RESPONSE GENE |
HS20988 | VOLTAGE-DEPENDENT CALCIUM CHANNEL TYPE A SUBUNIT ALPHA-1 |
HS20989 | CGI-140 |
HS20990 | WD40 REPEAT PROTEIN |
HS20991 | GDNF SUBFAMILY OF TGF-BETA FAMILY |
HS20992 | ZINC FINGER PROTEIN |
HS20993 | SPLICING FACTOR YJU2 |
HS20994 | MACROGLOBULIN / COMPLEMENT |
HS20995 | MACROGLOBULIN / COMPLEMENT |
HS20996 | VASCULAR CELL ADHESION MOLECULE 1 |
HS20997 | VASCULAR CELL ADHESION MOLECULE 1 |
HS20998 | VASCULAR CELL ADHESION MOLECULE 1 |
HS20999 | VASCULAR CELL ADHESION MOLECULE 1 |
HS21000 | VASCULAR CELL ADHESION MOLECULE 1 |