The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Pseudoliparis swirei | Chordata | hadal snailfish | Deep sea | 7,254 | the Mariana Trench (142°26′E, 11°07′N) | 2059687 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
NWPU_hadal_v1 | 626.4Mb | Chromosome | 2023 | JANBZZ01 | Northwestern Polytechnical University | PRJNA852951 | 96.00% | 21,161 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebrates | Elife | 38134226 |
Gene ID | Description |
---|---|
HS21001 | TETRATRICOPEPTIDE REPEAT PROTEIN 31 |
HS21002 | VACUOLAR ATP SYNTHASE SUBUNIT H |
HS21003 | ADULT RETINA PROTEIN |
HS21004 | |
HS21005 | ADENOSINE/GUANOSINE DIPHOSPHATASE |
HS21006 | MITOFERRIN-1-RELATED |
HS21007 | HOMEOBOX PROTEIN NKX |
HS21008 | ASPARTATE AMINOTRANSFERASE |
HS21009 | METAL TRANSPORTER CNNM |
HS21010 | DIHYDRODIPICOLINATE SYNTHASE |
HS21011 | MORN REPEAT-CONTAINING PROTEIN 4 |
HS21012 | TRANSCRIPTION FACTOR MLR1/2 |
HS21013 | SLIT HOMOLOG |
HS21014 | RHO GTPASE ACTIVATING PROTEIN 18,19-RELATED |
HS21015 | CRUMBS FAMILY MEMBER |
HS21016 | AGAP004733-PA |
HS21017 | HEXOKINASE |
HS21018 | TITIN |
HS21019 | UNCHARACTERIZED |
HS21020 | UNCHARACTERIZED |
HS21021 | GLUTAMINE SYNTHETASE |
HS21022 | B-BOX DOMAIN CONTAINING |
HS21023 | BUTYROPHILIN |
HS21024 | B-BOX DOMAIN CONTAINING |
HS21025 | |
HS21026 | |
HS21027 | |
HS21028 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
HS21029 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
HS21030 | 50S RIBOSOMAL PROTEIN L21 |
HS21031 | UPF0669 PROTEIN C6ORF120 |
HS21032 | PROTEASE M1 ZINC METALLOPROTEASE |
HS21033 | 39S RIBOSOMAL PROTEIN L45, MITOCHONDRIAL |
HS21034 | G-PROTEIN COUPLED RECEPTOR 158-RELATED |
HS21035 | PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY SUBUNIT |
HS21036 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
HS21037 | PERIAXIN/AHNAK |
HS21038 | 50S RIBOSOMAL PROTEIN L4 |
HS21039 | HYDROLETHALUS SYNDROME PROTEIN 1 |
HS21040 | COLLAGEN ALPHA |
HS21041 | TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE |
HS21042 | B-BOX DOMAIN CONTAINING |
HS21043 | CELL DIVISION CONTROL PROTEIN 6-RELATED |
HS21044 | UNCHARACTERIZED |
HS21045 | ACTIN |
HS21046 | |
HS21047 | NUCLEAR PORE COMPLEX PROTEIN NUP133 |
HS21048 | TRANSCRIPTION INITIATION FACTOR TFIID |
HS21049 | CALPAIN |
HS21050 | LOW-TEMPERATURE VIABILITY PROTEIN LTV1-RELATED |