The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Pseudoliparis swirei | Chordata | hadal snailfish | Deep sea | 7,254 | the Mariana Trench (142°26′E, 11°07′N) | 2059687 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
NWPU_hadal_v1 | 626.4Mb | Chromosome | 2023 | JANBZZ01 | Northwestern Polytechnical University | PRJNA852951 | 96.00% | 21,161 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebrates | Elife | 38134226 |
Gene ID | Description |
---|---|
HS20251 | SH3 MULTIPLE DOMAIN |
HS20252 | TRANSDUCIN BETA-LIKE 3 |
HS20253 | TNF RECEPTOR ASSOCIATED FACTOR |
HS20254 | RIBOSOMAL S SUBUNIT |
HS20255 | NADH-UBIQUINONE OXIDOREDUCTASE PDSW SUBUNIT |
HS20256 | 60S RIBOSOMAL PROTEIN L3-RELATED |
HS20257 | TEX2 PROTEIN-RELATED |
HS20258 | ZINC FINGER PROTEIN |
HS20259 | METHIONINE-R-SULFOXIDE REDUCTASE B1 |
HS20260 | HEPARAN SULFATE SULFOTRANSFERASE |
HS20261 | ACYLPYRUVASE |
HS20262 | BETA LACTAMASE DOMAIN |
HS20263 | SOLUTE CARRIER FAMILY 5 |
HS20264 | NITRATE, FORMATE, IRON DEHYDROGENASE |
HS20265 | IP01015P-RELATED |
HS20266 | FORMIN HOMOLOGY 2 FAMILY MEMBER |
HS20267 | 3BP-1 RELATED RHOGAP |
HS20268 | AQUAPORIN TRANSPORTER |
HS20269 | METEORIN-LIKE PROTEIN |
HS20270 | |
HS20271 | E3 SUMO-PROTEIN LIGASE CBX4 |
HS20272 | TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN |
HS20273 | ALPHA-GLUCOSIDASE |
HS20274 | DED DOMAIN-CONTAINING PROTEIN |
HS20275 | ALPHA-GLUCOSIDASE |
HS20276 | IRE1-RELATED |
HS20277 | TEX2 PROTEIN-RELATED |
HS20278 | |
HS20279 | AXIN |
HS20280 | CENTROSOMAL PROTEIN OF 112 KDA |
HS20281 | RIBOSOMAL PROTEIN S6 KINASE |
HS20282 | VOLTAGE-DEPENDENT CALCIUM CHANNEL GAMMA SUBUNIT |
HS20283 | GUANYL-NUCLEOTIDE EXCHANGE FACTOR |
HS20284 | SMALL INTEGRAL MEMBRANE PROTEIN 10 |
HS20285 | RHO FAMILY GTPASE |
HS20286 | SERINE/THREONINE-PROTEIN KINASE 19 |
HS20287 | DOM-3 RELATED |
HS20288 | PEROXISOMAL MEMBRANE PROTEIN PMP34-RELATED |
HS20289 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED |
HS20290 | KELCH PROTEIN |
HS20291 | METALLOPROTEASE |
HS20292 | NAD DEPENDENT EPIMERASE/DEHYDRATASE |
HS20293 | MODULATOR OF SMOOTHENED PROTEIN |
HS20294 | CENTROCORTIN FAMILY MEMBER |
HS20295 | TRANSMEMBRANE PROTEIN 180 |
HS20296 | IMMUNOGLOBULIN SUPERFAMILY MEMBER 6 |
HS20297 | ER LUMEN PROTEIN RETAINING RECEPTOR |
HS20298 | PROMETHIN |
HS20299 | G_PROTEIN_RECEP_F1_2 DOMAIN-CONTAINING PROTEIN |
HS20300 | COAGULATION FACTOR |