About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS20051CGTHBA PROTEIN -14 GENE PROTEIN
HS20052HEMOGLOBIN FAMILY MEMBER
HS20053HEMOGLOBIN FAMILY MEMBER
HS20054HEMOGLOBIN FAMILY MEMBER
HS20055HEMOGLOBIN FAMILY MEMBER
HS20056HEMOGLOBIN FAMILY MEMBER
HS20057HEMOGLOBIN FAMILY MEMBER
HS20058HEMOGLOBIN FAMILY MEMBER
HS20059KN MOTIF AND ANKYRIN REPEAT DOMAIN-CONTAINING
HS20060DEDICATOR OF CYTOKINESIS DOCK
HS20061ANGIOPOIETIN-LIKE PROTEIN 8
HS20062EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G
HS20063N-LINKED OLIGOSACCHARIDE PROCESSING
HS20064CYCLIC NUCLEOTIDE PHOSPHODIESTERASE
HS20065RNA RECOGNITION MOTIF-CONTAINING
HS20066TYROSINE-PROTEIN KINASE HOPSCOTCH
HS20067CDC37-RELATED
HS20068
HS20069INTERCELLULAR ADHESION MOLECULE
HS20070INTERCELLULAR ADHESION MOLECULE
HS20071INTERCELLULAR ADHESION MOLECULE
HS20072G-PROTEIN COUPLED RECEPTOR
HS20073CYTOSINE-SPECIFIC METHYLTRANSFERASE
HS20074EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G
HS20075PURINOCEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
HS20076PETER PAN-RELATED
HS20077ADIPOCYTE-SPECIFIC PROTEIN 4-RELATED
HS20078HISTONE-LYSINE N-METHYLTRANSFERASE SETD1
HS20079NAD DEPENDENT EPIMERASE/DEHYDRATASE
HS20080RAB GTPASE-ACTIVATING PROTEIN 1-LIKE
HS20081MYOSIN REGULATORY LIGHT CHAIN 2
HS20082SESQUIPEDALIAN
HS20083PROTEIN LIN1
HS20084EMO2-RELATED
HS20085
HS20086TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2
HS20087UNCHARACTERIZED
HS20088
HS20089
HS20090ARMC5 ARMADILLO REPEAT-CONTAINING -RELATED
HS20091CYTOCHROME C OXIDASE POLYPEPTIDE VIA
HS20092ADIPOR/PROGESTIN RECEPTOR-RELATED
HS20093CORONIN
HS20094CLAUDIN
HS20095SERINE/THREONINE PROTEIN PHOSPHATASE
HS20096SUPPRESSOR OF VARIEGATION 4-20-RELATED
HS20097SH3 AND MULTIPLE ANKYRIN REPEAT DOMAINS PROTEIN
HS20098SH3 AND MULTIPLE ANKYRIN REPEAT DOMAINS PROTEIN
HS20099PROLINE-SERINE-THREONINE PHOSPHATASE INTERACTING PROTEIN 1
HS20100SYNAPTOTAGMIN
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