About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_020961-T1
OS493_020962-T1
OS493_020963-T1
OS493_020964-T12'-DEOXYNUCLEOSIDE 5'-PHOSPHATE N-HYDROLASE 1
OS493_020965-T1SHORT-CHAIN DEHYDROGENASE/REDUCTASE
OS493_020966-T1ADAPTIN, ALPHA/GAMMA/EPSILON
OS493_020967-T1
OS493_020968-T1UNCHARACTERIZED
OS493_020969-T1
OS493_020970-T1RIBOSOMAL PROTEIN S9
OS493_020971-T1
OS493_020972-T1APOPTOSIS INHIBITOR 5-RELATED
OS493_020973-T1APOPTOSIS INHIBITOR 5-RELATED
OS493_020974-T1
OS493_020975-T1
OS493_020976-T1ZGC:172139
OS493_020977-T1
OS493_020978-T1
OS493_020979-T1
OS493_020980-T1LEUCOKININ RECEPTOR-RELATED
OS493_020981-T1
OS493_020982-T1
OS493_020983-T1
OS493_020984-T1ACTIVATING TRANSCRIPTION FACTOR 7 INTERACTING PROTEIN
OS493_020985-T1
OS493_020986-T1
OS493_020987-T1
OS493_020988-T1
OS493_020989-T1ACTIVATING TRANSCRIPTION FACTOR 7 INTERACTING PROTEIN
OS493_020990-T1
OS493_020991-T1
OS493_020992-T1
OS493_020993-T1
OS493_020994-T1THIOESTERASE 1/PROTEASE 1/LYSOPHOSPHOLIPASE L1
OS493_020995-T1
OS493_020996-T1
OS493_020997-T1
OS493_020998-T1
OS493_020999-T15-HYDROXYTRYPTAMINE RECEPTOR
OS493_021000-T1
OS493_021001-T1TELOMERE LENGTH REGULATION PROTEIN TEL2 FAMILY MEMBER
OS493_021002-T1TELOMERE LENGTH REGULATION PROTEIN TEL2 FAMILY MEMBER
OS493_021003-T1DENN DOMAIN-CONTAINING PROTEIN 4
OS493_021004-T1DENN DOMAIN-CONTAINING PROTEIN 4
OS493_021005-T1
OS493_021006-T1MYOTUBULARIN-RELATED
OS493_021007-T1PROTEIN-TYROSINE-PHOSPHATASE
OS493_021008-T1
OS493_021009-T1TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 11-RELATED
OS493_021010-T1SERUM AMYLOID A
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