About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_020751-T1
OS493_020752-T1INTELECTIN
OS493_020755-T1INTELECTIN
OS493_020756-T1
OS493_020757-T1
OS493_020758-T1TRANSIENT RECEPTOR POTENTIAL CHANNEL
OS493_020759-T1SERINE/THREONINE-PROTEIN KINASE
OS493_020760-T1CHITIN BINDING PERITROPHIN-A
OS493_020761-T1
OS493_020762-T1MALEYLACETOACETATE ISOMERASE
OS493_020763-T1MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED
OS493_020764-T1
OS493_020765-T1
OS493_020766-T1
OS493_020767-T1
OS493_020768-T1
OS493_020769-T1
OS493_020770-T1
OS493_020771-T1
OS493_020772-T1
OS493_020773-T1CXC DOMAIN-CONTAINING PROTEIN-RELATED
OS493_020774-T1
OS493_020775-T1
OS493_020776-T1
OS493_020777-T1
OS493_020778-T1
OS493_020779-T1EXPRESSED PROTEIN
OS493_020780-T1EUKARYOTIC ELONGATION FACTOR 2 KINASE-RELATED
OS493_020781-T1
OS493_020784-T1
OS493_020785-T1
OS493_020786-T1
OS493_020787-T1
OS493_020788-T1
OS493_020789-T1
OS493_020790-T1
OS493_020791-T1
OS493_020792-T1
OS493_020793-T1
OS493_020794-T1
OS493_020795-T1XAA-PRO AMINOPEPTIDASE 1
OS493_020796-T1DEOXYCYTIDYLATE DEAMINASE-RELATED
OS493_020797-T1
OS493_020798-T1DEOXYCYTIDYLATE DEAMINASE-RELATED
OS493_020799-T1
OS493_020800-T1DEOXYCYTIDYLATE DEAMINASE-RELATED
OS493_020801-T1
OS493_020802-T1
OS493_020803-T1
OS493_020804-T1
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