About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_020536-T1SNF2/RAD54 FAMILY MEMBER
OS493_020537-T1LEUCINE-RICH REPEAT-CONTAINING PROTEIN 31
OS493_020538-T1
OS493_020539-T1NACHT DOMAIN-CONTAINING PROTEIN
OS493_020540-T1
OS493_020541-T1SNF2/RAD54 FAMILY MEMBER
OS493_020542-T1
OS493_020543-T1
OS493_020544-T1
OS493_020545-T1PROTEIN KINASE DOMAIN-CONTAINING PROTEIN
OS493_020546-T1SNF2/RAD54 FAMILY MEMBER
OS493_020547-T1
OS493_020548-T1
OS493_020549-T1SNF2/RAD54 FAMILY MEMBER
OS493_020550-T1NACHT DOMAIN-CONTAINING PROTEIN
OS493_020551-T1
OS493_020552-T1STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER
OS493_020553-T1
OS493_020554-T1SNF2/RAD54 FAMILY MEMBER
OS493_020555-T1
OS493_020556-T1
OS493_020557-T1SNF2/RAD54 FAMILY MEMBER
OS493_020558-T1LEUCINE-RICH REPEAT-CONTAINING PROTEIN 31
OS493_020559-T1
OS493_020560-T1SNF2/RAD54 FAMILY MEMBER
OS493_020561-T1NACHT DOMAIN-CONTAINING PROTEIN
OS493_020563-T1SNF2/RAD54 FAMILY MEMBER
OS493_020564-T1SNF2/RAD54 FAMILY MEMBER
OS493_020565-T1
OS493_020566-T1NACHT DOMAIN-CONTAINING PROTEIN
OS493_020567-T1
OS493_020568-T1SNF2/RAD54 FAMILY MEMBER
OS493_020569-T1
OS493_020570-T1NACHT DOMAIN-CONTAINING PROTEIN
OS493_020571-T1SNF2/RAD54 FAMILY MEMBER
OS493_020572-T1SNF2/RAD54 FAMILY MEMBER
OS493_020573-T1
OS493_020574-T1PROTEIN KINASE DOMAIN-CONTAINING PROTEIN
OS493_020575-T1SNF2/RAD54 FAMILY MEMBER
OS493_020576-T1
OS493_020577-T1SLR5058 PROTEIN
OS493_020578-T1SNF2/RAD54 FAMILY MEMBER
OS493_020579-T1
OS493_020580-T1
OS493_020581-T1NACHT DOMAIN-CONTAINING PROTEIN
OS493_020582-T1
OS493_020583-T1
OS493_020584-T1HELICASE SRCAP-RELATED
OS493_020585-T1HELICASE SRCAP-RELATED
OS493_020586-T1CORONIN
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