About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_020484-T1
OS493_020486-T1
OS493_020487-T1
OS493_020488-T1UNCHARACTERIZED
OS493_020489-T1GLUTAREDOXIN FAMILY MEMBER
OS493_020490-T1SPROUTY
OS493_020491-T1TYROSINE-PROTEIN KINASE RECEPTOR
OS493_020492-T1TYROSINE-PROTEIN KINASE RECEPTOR
OS493_020493-T1
OS493_020494-T1INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN
OS493_020495-T1
OS493_020496-T1
OS493_020497-T1
OS493_020498-T1
OS493_020499-T1
OS493_020500-T1
OS493_020501-T1
OS493_020502-T1TYROSINE-PROTEIN KINASE RECEPTOR
OS493_020503-T1
OS493_020504-T1CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
OS493_020505-T1
OS493_020506-T1
OS493_020507-T1
OS493_020508-T1TYROSINE-PROTEIN KINASE RECEPTOR
OS493_020509-T1TYROSINE-PROTEIN KINASE RECEPTOR
OS493_020510-T12-OXO-4-HYDROXY-4-CARBOXY-5-UREIDOIMIDAZOLINE DECARBOXYLASE-RELATED
OS493_020511-T1MONOCARBOXYLATE TRANSPORTER
OS493_020512-T12-OXO-4-HYDROXY-4-CARBOXY-5-UREIDOIMIDAZOLINE DECARBOXYLASE-RELATED
OS493_020513-T1NUCLEAR HORMONE RECEPTOR
OS493_020514-T1PROLINE AND SERINE-RICH PROTEIN 1
OS493_020515-T1GLYCOSYLTRANSFERASE
OS493_020516-T1OPSIN
OS493_020517-T1UNCHARACTERIZED
OS493_020518-T1ATP-BINDING CASSETTE SUB-FAMILY C
OS493_020519-T1ARMADILLO-TYPE FOLD-RELATED
OS493_020520-T1
OS493_020521-T1SPROUTY
OS493_020522-T1CALCIUM BINDING PROTEINS
OS493_020523-T1
OS493_020525-T1UNCHARACTERIZED
OS493_020526-T1
OS493_020527-T1MITOCHONDRIA-EATING PROTEIN-RELATED
OS493_020528-T1APOPTOSIS-INDUCING FACTOR 1
OS493_020529-T1
OS493_020530-T1
OS493_020531-T1
OS493_020532-T1PROLINE AND SERINE-RICH PROTEIN 1
OS493_020533-T1PROLINE AND SERINE-RICH PROTEIN 1
OS493_020534-T1NUCLEOPORIN
OS493_020535-T1CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR
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