About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_021062-T1
OS493_021063-T1
OS493_021064-T1
OS493_021065-T1
OS493_021066-T1
OS493_021067-T1UNCHARACTERIZED
OS493_021068-T1UPF0705 PROTEIN C11ORF49
OS493_021069-T1
OS493_021070-T1
OS493_021071-T1
OS493_021072-T1REPETIN
OS493_021073-T1
OS493_021074-T1
OS493_021075-T1
OS493_021076-T1FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
OS493_021077-T1
OS493_021078-T1-
OS493_021079-T1FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
OS493_021080-T1PROTEIN TORNADO 1
OS493_021081-T1
OS493_021082-T1
OS493_021083-T1MALE STERILITY PROTEIN 2-RELATED
OS493_021084-T1MPS ONE BINDER KINASE ACTIVATOR-LIKE MOB
OS493_021085-T1TRANSCRIPTION INITIATION FACTOR IIH-RELATED
OS493_021086-T1MAP/MICROTUBULE AFFINITY-REGULATING KINASE
OS493_021087-T1
OS493_021088-T1
OS493_021089-T1
OS493_021090-T1
OS493_021091-T1TRANSCRIPTION INITIATION FACTOR IIH-RELATED
OS493_021092-T1TRANSCRIPTION INITIATION FACTOR IIH-RELATED
OS493_021093-T1
OS493_021094-T1ANKYRIN REPEAT FAMILY PROTEIN
OS493_021095-T1
OS493_021096-T1MAP KINASE KINASE KINASE SSK2-RELATED-RELATED
OS493_021098-T1MAP KINASE KINASE KINASE SSK2-RELATED-RELATED
OS493_021099-T1ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
OS493_021100-T1TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)
OS493_021101-T1MAP KINASE KINASE KINASE SSK2-RELATED-RELATED
OS493_021102-T1ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
OS493_021103-T1
OS493_021104-T1MAP KINASE KINASE KINASE SSK2-RELATED-RELATED
OS493_021105-T1
OS493_021106-T1
OS493_021107-T1POTE ANKYRIN DOMAIN
OS493_021108-T1
OS493_021109-T1CARBOHYDRATE SULFOTRANSFERASE
OS493_021110-T1CARBOHYDRATE SULFOTRANSFERASE
OS493_021111-T1LEUCOKININ RECEPTOR-RELATED
OS493_021112-T1LEUCOKININ RECEPTOR-RELATED
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