About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_021011-T1
OS493_021012-T1ZGC:172139
OS493_021013-T1GRIP AND COILED-COIL DOMAIN-CONTAINING PROTEIN 1
OS493_021014-T1
OS493_021015-T1
OS493_021016-T1F-BOX ONLY PROTEIN 47
OS493_021017-T1UBIQUITIN-CONJUGATING ENZYME E2
OS493_021018-T1SUBGROUP IIII AMINOTRANSFERASE
OS493_021019-T1CIRCADIAN LOCOMOTER OUTPUT CYCLES PROTEIN KAPUT
OS493_021020-T1LIPOATE-PROTEIN LIGASE
OS493_021021-T1LIPOATE-PROTEIN LIGASE
OS493_021022-T1
OS493_021023-T1CENTROMERE PROTEIN E
OS493_021024-T1
OS493_021025-T1
OS493_021026-T1MAJOR FACILITATOR SUPERFAMILY PROTEIN-RELATED
OS493_021027-T1
OS493_021028-T1MAJOR FACILITATOR SUPERFAMILY PROTEIN-RELATED
OS493_021029-T1MICROTUBULE ASSOCIATED PROTEIN XMAP215
OS493_021030-T1MICROTUBULE ASSOCIATED PROTEIN XMAP215
OS493_021031-T1MICROTUBULE ASSOCIATED PROTEIN XMAP215
OS493_021032-T1MAJOR FACILITATOR SUPERFAMILY PROTEIN-RELATED
OS493_021033-T1
OS493_021034-T1I-KAPPA-B-LIKE PROTEIN IKBL
OS493_021035-T1TRANSMEMBRANE PROTEIN 151 HOMOLOG
OS493_021036-T1
OS493_021037-T1UNCHARACTERIZED
OS493_021038-T1
OS493_021039-T1
OS493_021040-T1
OS493_021041-T1
OS493_021042-T1
OS493_021043-T1
OS493_021044-T1
OS493_021045-T1
OS493_021046-T1
OS493_021047-T1
OS493_021048-T1
OS493_021050-T1TRANS-SULFURATION ENZYME FAMILY MEMBER
OS493_021051-T1PHOSPHOETHANOLAMINE METHYLTRANSFERASE
OS493_021052-T1PHOSPHOETHANOLAMINE METHYLTRANSFERASE
OS493_021053-T1BCDNA.GH03377
OS493_021054-T15-OXOPROLINASE RELATED
OS493_021055-T15-OXOPROLINASE RELATED
OS493_021056-T1MALE STERILITY PROTEIN 2-RELATED
OS493_021057-T1
OS493_021058-T1
OS493_021059-T1
OS493_021060-T1
OS493_021061-T1
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