Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
| Gene ID | Description |
|---|---|
| Lsat_s043.g0010.t1 | |
| Lsat_s043.g0011.t1 | |
| Lsat_s043.g0012.t1 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Lsat_s043.g0013.t1 | PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED |
| Lsat_s043.g0014.t1 | PROTEIN DIAPHANOUS |
| Lsat_s043.g0015.t1 | TRANSMEMBRANE PROTEIN |
| Lsat_s043.g0016.t1 | HEAT SHOCK PROTEIN 70KDA |
| Lsat_s043.g0017.t1 | |
| Lsat_s043.g0018.t1 | |
| Lsat_s043.g0019.t1 | ZINC FINGER PROTEIN |
| Lsat_s043.g0020.t1 | TRANSMEMBRANE CHANNEL-RELATED |
| Lsat_s043.g0021.t1 | SI:CH211-108C17.2-RELATED-RELATED |
| Lsat_s043.g0022.t1 | HOMEO BOX HB9 LIKE A-RELATED |
| Lsat_s043.g0023.t1 | ZINC FINGER PROTEIN |
| Lsat_s043.g0024.t1 | ZINC FINGER PROTEIN |
| Lsat_s043.g0025.t1 | CELL DIVISION PROTEIN KINASE |
| Lsat_s043.g0026.t1 | |
| Lsat_s043.g0027.t1 | |
| Lsat_s043.g0028.t1 | CLASP |
| Lsat_s043.g0029.t1 | THYROTROPH EMBRYONIC FACTOR RELATED |
| Lsat_s043.g0030.t1 | |
| Lsat_s043.g0031.t1 | HYPOTHETICAL PROTEIN LOC691189 |
| Lsat_s043.g0032.t1 | HYPOTHETICAL PROTEIN LOC691189 |
| Lsat_s043.g0033.t1 | FMRFAMIDE RECEPTOR-RELATED |
| Lsat_s043.g0034.t1 | |
| Lsat_s043.g0035.t1 | HEAT SHOCK PROTEIN 70KDA |
| Lsat_s043.g0036.t1 | IQ CALMODULIN-BINDING MOTIF CONTAINING PROTEIN 1 |
| Lsat_s043.g0037.t1 | CYSTEINE-RICH MOTOR NEURON 1 PROTEIN |
| Lsat_s043.g0038.t1 | ZINC FINGER PROTEIN |
| Lsat_s043.g0039.t1 | SINGLE-STRAND SELECTIVE MONOFUNCTIONAL URACIL DNA GLYCOSYLASE |
| Lsat_s043.g0040.t1 | |
| Lsat_s043.g0041.t1 | BUCENTAUR RELATED |
| Lsat_s043.g0042.t1 | MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B |
| Lsat_s043.g0043.t1 | |
| Lsat_s043.g0044.t1 | BONUS, ISOFORM C-RELATED |
| Lsat_s043.g0045.t1 | HISTONE ACETYLTRANSFERASE TYPE B CATALYTIC SUBUNIT |
| Lsat_s043.g0046.t1 | ASPARTATE AMINOTRANSFERASE |
| Lsat_s043.g0047.t1 | |
| Lsat_s043.g0048.t1 | CELL DIVISION CYCLE AND APOPTOSIS REGULATOR PROTEIN |
| Lsat_s043.g0049.t1 | - |
| Lsat_s043.g0050.t1 | VILLIN |
| Lsat_s043.g0051.t1 | VILLIN |
| Lsat_s043.g0052.t1 | |
| Lsat_s043.g0053.t1 | ECDYSONE-INDUCIBLE GENE E1, ISOFORM A |
| Lsat_s043.g0054.t1 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Lsat_s043.g0055.t1 | |
| Lsat_s043.g0056.t1 | UNCHARACTERIZED |
| Lsat_s043.g0057.t1 | DOUBLE-STRANDED RNA-BINDING ZINC FINGER PROTEIN |
| Lsat_s043.g0058.t1 | |
| Lsat_s043.g0059.t1 |
