About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s042.g0020.t1ERLIN (ER LIPID RAFT ASSOCIATED PROTEIN) HOMOLOG
Lsat_s042.g0021.t1
Lsat_s042.g0022.t1
Lsat_s042.g0023.t1UNCHARACTERIZED
Lsat_s042.g0024.t1CCHC-TYPE DOMAIN-CONTAINING PROTEIN
Lsat_s042.g0025.t1
Lsat_s042.g0026.t1DIPHTHINE METHYLTRANSFERASE
Lsat_s042.g0027.t1POLYCOMB GROUP PROTEIN
Lsat_s042.g0028.t1METHYLTRANSFERASE-RELATED
Lsat_s042.g0029.t1
Lsat_s042.g0030.t1UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
Lsat_s042.g0031.t1DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 7B
Lsat_s042.g0032.t1PROTEIN PM1
Lsat_s042.g0033.t1TYROSINE-PROTEIN KINASE RECEPTOR
Lsat_s042.g0034.t1
Lsat_s042.g0035.t1(E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME
Lsat_s042.g0036.t1
Lsat_s042.g0037.t1TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 13
Lsat_s042.g0038.t1TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 13
Lsat_s042.g0039.t1
Lsat_s042.g0040.t1IQ DOMAIN-CONTAINING PROTEIN K
Lsat_s042.g0041.t1
Lsat_s042.g0042.t1-
Lsat_s042.g0043.t1
Lsat_s042.g0044.t1
Lsat_s042.g0045.t1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Lsat_s042.g0046.t1
Lsat_s042.g0047.t1
Lsat_s042.g0048.t1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Lsat_s042.g0049.t1
Lsat_s042.g0050.t1NUCLEOSOME-REMODELING FACTOR SUBUNIT BPTF
Lsat_s042.g0051.t1
Lsat_s042.g0052.t1
Lsat_s042.g0053.t1PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Lsat_s042.g0054.t1POLY ADP-RIBOSE GLYCOHYDROLASE
Lsat_s042.g0055.t1POLY ADP-RIBOSE GLYCOHYDROLASE
Lsat_s042.g0056.t1POLY ADP-RIBOSE GLYCOHYDROLASE
Lsat_s042.g0057.t1
Lsat_s042.g0058.t1POLY ADP-RIBOSE GLYCOHYDROLASE
Lsat_s042.g0059.t140S RIBOSOMAL PROTEIN S24
Lsat_s042.g0060.t1SRCR DOMAIN-CONTAINING PROTEIN
Lsat_s042.g0061.t1OXA1
Lsat_s042.g0062.t1CRUMBS FAMILY MEMBER
Lsat_s042.g0063.t1
Lsat_s042.g0064.t1PROTEIN CBG16428
Lsat_s042.g0065.t1SYNAPTOTAGMIN
Lsat_s042.g0066.t1
Lsat_s042.g0067.t1EUKARYOTIC TRANSLATION INITIATION FACTOR 3
Lsat_s042.g0068.t1ZINC FINGER PROTEIN 598
Lsat_s042.g0069.t1DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE
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