About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s042.g0070.t13BP-1 RELATED RHOGAP
Lsat_s042.g0071.t1EXOSOME COMPLEX COMPONENT
Lsat_s042.g0072.t1ATP-DEPENDENT RNA HELICASE DBP3
Lsat_s042.g0073.t1RHO FAMILY GTPASE
Lsat_s042.g0074.t1RHO FAMILY GTPASE
Lsat_s042.g0075.t1WD REPEAT PROTEIN 26-RELATED
Lsat_s042.g0076.t1SERINE/THREONINE-PROTEIN KINASE LMTK1
Lsat_s042.g0077.t1
Lsat_s042.g0078.t1GUANYL-NUCLEOTIDE EXCHANGE FACTOR
Lsat_s042.g0079.t1
Lsat_s042.g0080.t1-
Lsat_s042.g0081.t1CALPAIN
Lsat_s042.g0082.t1
Lsat_s042.g0083.t1EPITHELIAL MEMBRANE PROTEIN-RELATED
Lsat_s042.g0084.t1
Lsat_s042.g0085.t1-
Lsat_s042.g0086.t1SEC24-RELATED PROTEIN
Lsat_s042.g0087.t1MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S24
Lsat_s042.g0088.t1RE74312P
Lsat_s042.g0089.t1
Lsat_s042.g0090.t1
Lsat_s042.g0091.t1CCR4 NOT-RELATED
Lsat_s042.g0092.t1CENTROSOMAL PROTEIN OF 131 KDA
Lsat_s042.g0093.t1PROTEIN HID1
Lsat_s042.g0094.t1ATP-DEPENDENT RNA HELICASE RHLE-RELATED
Lsat_s042.g0095.t1PHD FINGER-LIKE DOMAIN-CONTAINING PROTEIN 5A
Lsat_s042.g0096.t1SEC14 RELATED PROTEIN
Lsat_s042.g0097.t1RHOMBOID-RELATED PROTEIN
Lsat_s042.g0098.t1COLLAGEN ALPHA
Lsat_s042.g0099.t1COLLAGEN ALPHA
Lsat_s042.g0100.t1EGF-LIKE DOMAIN-CONTAINING PROTEIN
Lsat_s042.g0101.t1
Lsat_s042.g0102.t1COLLAGEN ALPHA
Lsat_s042.g0103.t1COLLAGEN ALPHA
Lsat_s042.g0104.t1
Lsat_s042.g0105.t1COLLAGEN ALPHA
Lsat_s042.g0106.t1
Lsat_s042.g0107.t1
Lsat_s042.g0108.t1REGULATORY PROTEIN ZESTE
Lsat_s042.g0109.t1COLLAGEN ALPHA
Lsat_s042.g0110.t1-
Lsat_s042.g0111.t1-
Lsat_s042.g0112.t1PROTEIN CBG12474
Lsat_s042.g0113.t1
Lsat_s042.g0114.t1
Lsat_s042.g0115.t1TRANSMEMBRANE CHANNEL-RELATED
Lsat_s042.g0116.t1
Lsat_s042.g0117.t1CALCIUM-REGULATED HEAT STABLE PROTEIN CRHSP-24-RELATED
Lsat_s042.g0118.t1
Lsat_s042.g0119.t1PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY SUBUNIT
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