About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s041.g0049.t1
Lsat_s041.g0050.t1BARRIER TO AUTOINTEGRATION FACTOR 2
Lsat_s041.g0051.t1
Lsat_s041.g0052.t1BARRIER TO AUTOINTEGRATION FACTOR 2
Lsat_s041.g0053.t1
Lsat_s041.g0054.t1MATING RESPONSE PROTEIN POI2
Lsat_s041.g0055.t1SIMILAR TO ENSANGP00000021391
Lsat_s041.g0056.t1AGAP001464-PB
Lsat_s041.g0057.t1ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE
Lsat_s041.g0058.t1SERINE INCORPORATOR
Lsat_s041.g0059.t1DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE
Lsat_s041.g0060.t1PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED
Lsat_s041.g0061.t1FTP DOMAIN-CONTAINING PROTEIN
Lsat_s041.g0062.t1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Lsat_s041.g0063.t1IQ DOMAIN-CONTAINING PROTEIN H
Lsat_s041.g0064.t1
Lsat_s041.g0065.t1ORGANIC ANION TRANSPORTER
Lsat_s041.g0066.t1G-PROTEIN COUPLED RECEPTOR
Lsat_s041.g0067.t1G-PROTEIN COUPLED RECEPTOR
Lsat_s041.g0068.t1PYGOPUS
Lsat_s041.g0069.t1TUBULIN POLYGLUTAMYLASE
Lsat_s041.g0070.t1COATOMER SUBUNIT EPSILON
Lsat_s041.g0071.t1
Lsat_s041.g0072.t1
Lsat_s041.g0073.t1S-ANTIGEN PROTEIN
Lsat_s041.g0074.t1
Lsat_s041.g0075.t1S-ANTIGEN PROTEIN
Lsat_s041.g0076.t1
Lsat_s041.g0077.t1ANKYRIN REPEAT-CONTAINING
Lsat_s041.g0078.t1
Lsat_s041.g0079.t1
Lsat_s041.g0080.t1PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED
Lsat_s041.g0081.t1
Lsat_s041.g0082.t1INTERLEUKIN-1 RECEPTOR FAMILY MEMBER
Lsat_s041.g0083.t1
Lsat_s041.g0084.t1EGF-LIKE DOMAIN-CONTAINING PROTEIN
Lsat_s041.g0085.t1
Lsat_s041.g0086.t1
Lsat_s041.g0087.t1TRANSIENT RECEPTOR POTENTIAL CHANNEL
Lsat_s041.g0088.t1TRANSIENT RECEPTOR POTENTIAL CHANNEL
Lsat_s041.g0089.t1DENN DOMAIN-CONTAINING PROTEIN 4
Lsat_s041.g0090.t1RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN
Lsat_s041.g0091.t1PROTEIN FAM221A-RELATED
Lsat_s041.g0092.t1
Lsat_s041.g0093.t1
Lsat_s041.g0094.t1
Lsat_s041.g0095.t1COMM DOMAIN CONTAINING PROTEIN 10
Lsat_s041.g0096.t1XPA-BINDING PROTEIN 1-RELATED
Lsat_s041.g0097.t1MUTATED IN BLADDER CANCER 1
Lsat_s041.g0098.t1
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