About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s041.g0199.t1MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Lsat_s041.g0200.t1MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Lsat_s041.g0201.t1-
Lsat_s041.g0202.t1ALPHA/BETA HYDROLASE DOMAIN-CONTAINING PROTEIN
Lsat_s041.g0203.t1ZGC:101016
Lsat_s041.g0204.t1UPF0147 PROTEIN MJ1419
Lsat_s041.g0205.t1
Lsat_s041.g0206.t1PROTEIN CBG12054-RELATED
Lsat_s041.g0207.t1CHONDROITIN SYNTHASE
Lsat_s041.g0208.t1
Lsat_s041.g0209.t1CHONDROITIN SYNTHASE
Lsat_s041.g0210.t1ANK_REP_REGION DOMAIN-CONTAINING PROTEIN
Lsat_s041.g0211.t1
Lsat_s041.g0212.t1
Lsat_s041.g0213.t1
Lsat_s041.g0214.t1
Lsat_s041.g0215.t1
Lsat_s041.g0216.t1
Lsat_s041.g0217.t1
Lsat_s041.g0218.t1
Lsat_s041.g0219.t1
Lsat_s041.g0220.t1
Lsat_s041.g0221.t1
Lsat_s041.g0222.t1NEUROTRANSMITTER GATED ION CHANNEL
Lsat_s041.g0223.t1
Lsat_s041.g0224.t1NEUROTRANSMITTER GATED ION CHANNEL
Lsat_s041.g0225.t1-
Lsat_s041.g0226.t1SODIUM/CALCIUM EXCHANGER
Lsat_s041.g0227.t1
Lsat_s041.g0228.t1SODIUM/CALCIUM EXCHANGER
Lsat_s041.g0229.t1CS DOMAIN-CONTAINING PROTEIN
Lsat_s042.g0001.t1SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
Lsat_s042.g0002.t1SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
Lsat_s042.g0003.t1ZINC FINGER AND BTB DOMAIN-CONTAINING
Lsat_s042.g0004.t1CHITINASE
Lsat_s042.g0005.t1
Lsat_s042.g0006.t1ZINC-FINGER PROTEIN NOLZ1-RELATED
Lsat_s042.g0007.t1
Lsat_s042.g0008.t1
Lsat_s042.g0009.t1
Lsat_s042.g0010.t1
Lsat_s042.g0011.t1YIPPEE DOMAIN-CONTAINING PROTEIN
Lsat_s042.g0012.t1
Lsat_s042.g0013.t1
Lsat_s042.g0014.t1
Lsat_s042.g0015.t1
Lsat_s042.g0016.t1
Lsat_s042.g0017.t1
Lsat_s042.g0018.t1WINGS APART-LIKE PROTEIN HOMOLOG
Lsat_s042.g0019.t1
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