About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s042.g0120.t1-
Lsat_s042.g0121.t1
Lsat_s042.g0122.t1TETRATRICOPEPTIDE-LIKE HELICAL
Lsat_s042.g0123.t1FAS-BINDING FACTOR 1
Lsat_s042.g0124.t1NUCLEOSIDE DIPHOSPHATE KINASE
Lsat_s042.g0125.t1SAPOSIN-RELATED
Lsat_s042.g0126.t1DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN
Lsat_s042.g0127.t1
Lsat_s042.g0128.t1-
Lsat_s042.g0129.t1KELCH PROTEIN
Lsat_s042.g0130.t1
Lsat_s042.g0131.t1
Lsat_s042.g0132.t1D123 PROTEIN
Lsat_s042.g0133.t1CONTACTIN 5
Lsat_s042.g0134.t1UBIQUITIN-CONJUGATING ENZYME E2
Lsat_s042.g0135.t1CDGSH IRON-SULFUR DOMAIN-CONTAINING PROTEIN 1
Lsat_s042.g0136.t1VON WILLEBRAND FACTOR A DOMAIN-CONTAINING PROTEIN 3A
Lsat_s042.g0137.t1DYNEIN ASSEMBLY FACTOR 5, AXONEMAL
Lsat_s042.g0138.t1ZINC FINGER PROTEIN 142
Lsat_s042.g0139.t1
Lsat_s042.g0140.t1
Lsat_s042.g0141.t1FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220)
Lsat_s042.g0142.t1CHITIN BINDING PERITROPHIN-A
Lsat_s042.g0143.t1CALPAIN
Lsat_s042.g0144.t1
Lsat_s042.g0145.t1CALPAIN
Lsat_s042.g0146.t1FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220)
Lsat_s042.g0147.t1
Lsat_s042.g0148.t1
Lsat_s042.g0149.t1CALPAIN
Lsat_s042.g0150.t1FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220)
Lsat_s042.g0151.t1
Lsat_s042.g0152.t1FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220)
Lsat_s042.g0153.t1CALPAIN
Lsat_s042.g0154.t1LEUCINE ZIPPER PROTEIN 4-RELATED
Lsat_s042.g0155.t1
Lsat_s042.g0156.t1
Lsat_s042.g0157.t1SERINE/ARGININE REPETITIVE MATRIX PROTEIN 5-RELATED
Lsat_s042.g0158.t1
Lsat_s042.g0159.t1UNCHARACTERIZED
Lsat_s042.g0160.t1UNC-13-4A, ISOFORM B
Lsat_s042.g0161.t1
Lsat_s042.g0162.t1
Lsat_s042.g0163.t1ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE
Lsat_s042.g0164.t1
Lsat_s042.g0165.t1UNCHARACTERIZED
Lsat_s042.g0166.t1
Lsat_s042.g0167.t1L-THREONINE ALDOLASE-RELATED
Lsat_s042.g0168.t1UNCHARACTERIZED
Lsat_s042.g0169.t1PROTEIN CBG24663
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