About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s041.g0149.t1
Lsat_s041.g0150.t1
Lsat_s041.g0151.t1-
Lsat_s041.g0152.t1POTASSIUM CHANNEL, SUBFAMILY K
Lsat_s041.g0153.t1
Lsat_s041.g0154.t1FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED
Lsat_s041.g0155.t1
Lsat_s041.g0156.t1
Lsat_s041.g0157.t1ZINC FINGER PROTEIN
Lsat_s041.g0158.t1KINESIN-RELATED PROTEIN 6
Lsat_s041.g0159.t1DIADENOSINE 5,5-P1,P4-TETRAPHOSPHATE PYROPHOSPHOHYDROLASE MUTT
Lsat_s041.g0160.t1UBIQUITIN THIOESTERASE
Lsat_s041.g0161.t1
Lsat_s041.g0162.t1
Lsat_s041.g0163.t1
Lsat_s041.g0164.t1
Lsat_s041.g0165.t1U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN MPP10
Lsat_s041.g0166.t1DEFECTIVE PROBOSCIS EXTENSION RESPONSE DPR -RELATED
Lsat_s041.g0167.t1
Lsat_s041.g0168.t1
Lsat_s041.g0169.t1CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Lsat_s041.g0170.t1
Lsat_s041.g0171.t1
Lsat_s041.g0172.t1
Lsat_s041.g0173.t1
Lsat_s041.g0174.t1
Lsat_s041.g0175.t1
Lsat_s041.g0176.t1
Lsat_s041.g0177.t1
Lsat_s041.g0178.t1
Lsat_s041.g0179.t1SPERM-SPECIFIC FAMILY, CLASS Q
Lsat_s041.g0180.t1CYCLINS
Lsat_s041.g0181.t1YIPPEE DOMAIN-CONTAINING PROTEIN
Lsat_s041.g0182.t1
Lsat_s041.g0183.t1FMRFAMIDE RECEPTOR-RELATED
Lsat_s041.g0184.t1
Lsat_s041.g0185.t1FOCADHESIN FAMILY MEMBER
Lsat_s041.g0186.t1
Lsat_s041.g0187.t1FOCADHESIN FAMILY MEMBER
Lsat_s041.g0188.t1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Lsat_s041.g0189.t1
Lsat_s041.g0190.t1
Lsat_s041.g0191.t1
Lsat_s041.g0192.t1
Lsat_s041.g0193.t1POS9-ACTIVATING FACTOR FAP7-RELATED
Lsat_s041.g0194.t1POLY ADP-RIBOSE POLYMERASE FAMILY, MEMBER PARP
Lsat_s041.g0195.t1UNCHARACTERIZED
Lsat_s041.g0196.t1
Lsat_s041.g0197.t1UNCHARACTERIZED
Lsat_s041.g0198.t1SOLUTE CARRIER FAMILY 2
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