About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s043.g0060.t1VIRAL IAP-ASSOCIATED FACTOR HOMOLOG
Lsat_s043.g0061.t1PHD FINGER PROTEIN 20-RELATED
Lsat_s043.g0062.t1SOLUTE CARRIER FAMILY 17
Lsat_s043.g0063.t1ADAM10/ADAM17 METALLOPEPTIDASE FAMILY MEMBER
Lsat_s043.g0064.t1FUSELESS, ISOFORM A
Lsat_s043.g0065.t1TETRASPANIN
Lsat_s043.g0066.t1
Lsat_s043.g0067.t1
Lsat_s043.g0068.t1TETRASPANIN
Lsat_s043.g0069.t1TETRASPANIN
Lsat_s043.g0070.t1
Lsat_s043.g0071.t1TETRASPANIN
Lsat_s043.g0072.t1
Lsat_s043.g0073.t1ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7
Lsat_s043.g0074.t1
Lsat_s043.g0075.t1TETRASPANIN
Lsat_s043.g0076.t1
Lsat_s043.g0077.t1FARNESYL-DIPHOSPHATE FARNESYLTRANSFERASE
Lsat_s043.g0078.t1TRANSCRIPTION INITIATION FACTOR TFIID
Lsat_s043.g0079.t1VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN
Lsat_s043.g0080.t1PEPTIDYL-TRNA HYDROLASE 2
Lsat_s043.g0081.t1
Lsat_s043.g0082.t1ASPARTYL/ASPARAGINYL BETA-HYDROXYLASE
Lsat_s043.g0083.t1T-CELL LYMPHOMA BREAKPOINT-ASSOCIATED TARGET 1-RELATED
Lsat_s043.g0084.t1
Lsat_s043.g0085.t1DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
Lsat_s043.g0086.t1DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
Lsat_s043.g0087.t1DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
Lsat_s043.g0088.t1DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
Lsat_s043.g0089.t1PUTATIVE HOMEODOMAIN TRANSCRIPTION FACTOR PHTF
Lsat_s043.g0090.t1
Lsat_s043.g0091.t1OXYSTEROL-BINDING PROTEIN-RELATED
Lsat_s043.g0092.t1BETA-1,4-MANNOSYL-GLYCOPROTEIN BETA-1,4-N-ACETYLGLUCOSAMINYL-TRANSFERASE
Lsat_s043.g0093.t1
Lsat_s043.g0094.t1
Lsat_s043.g0095.t1
Lsat_s043.g0096.t1
Lsat_s043.g0097.t1
Lsat_s043.g0098.t1CHLORIDE CHANNEL CLIC-LIKE PROTEIN 1
Lsat_s043.g0099.t1DENN DOMAIN-CONTAINING PROTEIN 4
Lsat_s043.g0100.t1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Lsat_s043.g0101.t1N-ACETYLNEURAMINATE 9-O-ACETYLTRANSFERASE
Lsat_s043.g0102.t1BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
Lsat_s043.g0103.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s043.g0104.t1ADENYLATE CYCLASE TYPE 1
Lsat_s043.g0105.t1
Lsat_s043.g0106.t1
Lsat_s043.g0107.t1
Lsat_s043.g0108.t1
Lsat_s043.g0109.t1BETA-MANNOSIDASE
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