About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_019400-T1
OS493_019401-T1
OS493_019402-T1
OS493_019403-T1
OS493_019404-T1
OS493_019405-T1EXPRESSED PROTEIN
OS493_019406-T1
OS493_019407-T1
OS493_019408-T1
OS493_019409-T1
OS493_019410-T1
OS493_019411-T1
OS493_019412-T1
OS493_019413-T1
OS493_019414-T1
OS493_019415-T1
OS493_019416-T1SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED
OS493_019417-T1ZINC FINGER, RING/FYVE/PHD-TYPE
OS493_019418-T1
OS493_019419-T1
OS493_019420-T1
OS493_019421-T1
OS493_019422-T1
OS493_019423-T1
OS493_019424-T1KINESIN LIGHT CHAIN
OS493_019425-T1ARFAPTIN-RELATED
OS493_019426-T1KINESIN LIGHT CHAIN
OS493_019427-T1
OS493_019428-T1
OS493_019429-T1OVOCHYMASE-RELATED
OS493_019430-T1TYROSINE-PROTEIN KINASE RECEPTOR
OS493_019431-T1
OS493_019432-T1
OS493_019434-T1
OS493_019435-T1
OS493_019436-T1CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
OS493_019437-T1
OS493_019438-T1
OS493_019439-T1
OS493_019440-T1
OS493_019441-T1
OS493_019442-T1
OS493_019443-T1
OS493_019444-T1
OS493_019445-T1L-ASPARAGINASE
OS493_019446-T1
OS493_019447-T1L-ASPARAGINASE
OS493_019448-T1CYCLINS
OS493_019449-T1MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM9B
OS493_019450-T1STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER
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