About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_019247-T1STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE
OS493_019248-T1
OS493_019249-T1
OS493_019250-T1OPSIN
OS493_019252-T1
OS493_019253-T1
OS493_019254-T1TYROSINE-PROTEIN KINASE
OS493_019255-T1HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_019256-T1S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN
OS493_019257-T1S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN
OS493_019258-T1SI:CH211-266K2.1
OS493_019259-T1
OS493_019260-T1S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN
OS493_019261-T1
OS493_019262-T1S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN
OS493_019263-T1S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN
OS493_019264-T1S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN
OS493_019265-T1
OS493_019266-T1
OS493_019267-T1
OS493_019268-T1
OS493_019269-T15-HYDROXYTRYPTAMINE RECEPTOR
OS493_019270-T1
OS493_019271-T1FOLLISTATIN-RELATED
OS493_019272-T1AMPLIFIED IN BREAST CANCER 2-RELATED
OS493_019273-T1AMPLIFIED IN BREAST CANCER 2-RELATED
OS493_019274-T1PROHIBITIN
OS493_019276-T1
OS493_019277-T1ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD
OS493_019278-T1AMPLIFIED IN BREAST CANCER 2-RELATED
OS493_019279-T1AMPLIFIED IN BREAST CANCER 2-RELATED
OS493_019280-T1
OS493_019281-T1
OS493_019282-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_019283-T1
OS493_019284-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_019285-T1LATROPHILIN RECEPTOR-LIKE PROTEIN A
OS493_019286-T1
OS493_019287-T1
OS493_019288-T1LATROPHILIN RECEPTOR-LIKE PROTEIN A
OS493_019289-T1
OS493_019290-T1LEUCOKININ RECEPTOR-RELATED
OS493_019291-T1EPH RECEPTOR A5
OS493_019292-T1EPH RECEPTOR A5
OS493_019293-T1EPH RECEPTOR A5
OS493_019294-T1
OS493_019295-T1THROMBOSPONDIN TYPE I DOMAIN-CONTAINING 1
OS493_019296-T1
OS493_019297-T1EXPRESSED PROTEIN
OS493_019298-T1EPH RECEPTOR A5
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