About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_019299-T1EPH RECEPTOR A5
OS493_019300-T1
OS493_019301-T1TRANSCRIPTION FACTOR 19
OS493_019302-T1
OS493_019303-T1
OS493_019304-T1
OS493_019305-T1
OS493_019306-T1F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
OS493_019307-T1
OS493_019308-T1
OS493_019309-T1
OS493_019310-T1
OS493_019311-T1
OS493_019312-T1
OS493_019313-T1PROTEIN CBG23806
OS493_019314-T1
OS493_019315-T1
OS493_019316-T1
OS493_019317-T1
OS493_019318-T1PROTEIN G1-LIKE2
OS493_019319-T1OTU DOMAIN CONTAINING PROTEIN
OS493_019320-T1VERTNIN
OS493_019321-T1
OS493_019322-T1DNA HELICASE-RELATED
OS493_019323-T1
OS493_019324-T1
OS493_019325-T1
OS493_019326-T1
OS493_019327-T1
OS493_019328-T1
OS493_019329-T1
OS493_019330-T1
OS493_019331-T1
OS493_019332-T1
OS493_019333-T1PROTEIN G1-LIKE2
OS493_019334-T1
OS493_019335-T1
OS493_019336-T1
OS493_019337-T1
OS493_019338-T1
OS493_019339-T1
OS493_019340-T1
OS493_019341-T1SIMILAR TO RIKEN CDNA E130308A19
OS493_019342-T1
OS493_019343-T1
OS493_019344-T1
OS493_019345-T1
OS493_019346-T1
OS493_019347-T1CXC DOMAIN-CONTAINING PROTEIN-RELATED
OS493_019348-T1CXC DOMAIN-CONTAINING PROTEIN-RELATED
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