About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_017242-T1
OS493_017243-T1
OS493_017244-T1TUMOR SUSCEPTIBILITY GENE 101 PROTEIN-RELATED
OS493_017246-T1
OS493_017247-T1
OS493_017248-T1
OS493_017249-T1
OS493_017250-T1
OS493_017251-T1
OS493_017252-T1BETA TRANSDUCIN-RELATED PROTEIN
OS493_017253-T1CORTACTIN AND DREBRIN
OS493_017254-T1
OS493_017255-T1
OS493_017256-T1
OS493_017257-T1DNA HELICASE RECQ FAMILY MEMBER
OS493_017259-T1
OS493_017260-T1
OS493_017261-T1
OS493_017262-T1
OS493_017263-T1
OS493_017264-T1OTU DOMAIN CONTAINING PROTEIN
OS493_017265-T1
OS493_017266-T1
OS493_017267-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_017268-T1
OS493_017269-T1
OS493_017270-T1
OS493_017271-T1POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING
OS493_017272-T1POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING
OS493_017273-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_017274-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_017275-T1HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_017276-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_017277-T1
OS493_017278-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_017279-T1
OS493_017280-T1
OS493_017282-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_017283-T1
OS493_017284-T1
OS493_017285-T1
OS493_017286-T1
OS493_017287-T1CYSTINOSIN
OS493_017288-T1DEOXYRIBOSE-PHOSPHATE ALDOLASE
OS493_017289-T1MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B
OS493_017290-T1SOX TRANSCRIPTION FACTOR
OS493_017291-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_017292-T1
OS493_017293-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_017294-T1
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