About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 312 313 314 315 316 317 318 319 320 321 Forward> Last>>        750 pages in total

Gene IDDescription
OS493_017086-T1
OS493_017087-T1
OS493_017088-T1
OS493_017089-T1
OS493_017090-T1-
OS493_017091-T1CDGSH IRON-SULFUR DOMAIN-CONTAINING PROTEIN 1
OS493_017092-T1ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE
OS493_017093-T1UBIQUITIN-CONJUGATING ENZYME E2
OS493_017094-T1UBIQUITIN-CONJUGATING ENZYME E2
OS493_017095-T1NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED
OS493_017096-T1
OS493_017097-T1
OS493_017098-T1OLIGOSACCHARYLTRANSFERASE COMPLEX SUBUNIT OSTC
OS493_017099-T1CELL DIVISION PROTEIN KINASE
OS493_017100-T12-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED
OS493_017101-T1
OS493_017102-T12-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED
OS493_017103-T12-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED
OS493_017104-T1HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_017105-T1ATP-BINDING CASSETTE SUB-FAMILY C
OS493_017106-T1ATP-BINDING CASSETTE SUB-FAMILY C
OS493_017107-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_017112-T1HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_017113-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_017114-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_017115-T1HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_017116-T1HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_017117-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_017118-T1HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_017119-T1HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_017120-T1ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_017121-T1WNT RELATED
OS493_017122-T1
OS493_017123-T1HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_017124-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_017125-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_017126-T1NEUROHYPOPHYSIAL HORMONES, N-TERMINAL DOMAIN CONTAINING PROTEIN
OS493_017127-T1
OS493_017128-T1
OS493_017129-T1TUBULIN
OS493_017130-T1TUBULIN
OS493_017131-T1ANNEXIN
OS493_017132-T1
OS493_017133-T1CARBON CATABOLITE REPRESSOR PROTEIN 4
OS493_017134-T1
OS493_017135-T1TRANSMEMBRANE PROTEIN 72
OS493_017136-T1HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_017137-T1HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_017138-T1HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_017139-T1HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
TOP