About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_016983-T1EXPRESSED PROTEIN
OS493_016984-T1
OS493_016985-T1VON WILLEBRAND FACTOR C AND EGF DOMAIN-CONTAINING PROTEIN
OS493_016986-T1CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
OS493_016987-T1NG37
OS493_016988-T1TUBULIN POLYGLUTAMYLASE
OS493_016989-T1FI04487P
OS493_016990-T1FI04487P
OS493_016991-T1SODIUM/HYDROGEN EXCHANGER
OS493_016992-T1UNCHARACTERIZED
OS493_016993-T1ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_016994-T1
OS493_016995-T15-HYDROXYTRYPTAMINE RECEPTOR
OS493_016996-T15-HYDROXYTRYPTAMINE RECEPTOR
OS493_016997-T1LEUKOCYTE CELL-DERIVED CHEMOTAXIN 2
OS493_016998-T1LEUKOCYTE CELL-DERIVED CHEMOTAXIN 2
OS493_016999-T1ANKYRIN REPEAT PROTEIN
OS493_017000-T1PROMININ PROM PROTEIN
OS493_017001-T1GLYCOPROTEIN HORMONE RECEPTOR
OS493_017002-T1IG(IMMUNOGLOBULIN) AND LRR(LEUCINE RICH REPEAT) DOMAINS
OS493_017003-T1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
OS493_017004-T1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
OS493_017005-T1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
OS493_017006-T1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
OS493_017007-T1
OS493_017008-T1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
OS493_017009-T1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
OS493_017010-T1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
OS493_017011-T1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
OS493_017012-T1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
OS493_017013-T1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
OS493_017014-T1E3 UBIQUITIN-PROTEIN LIGASE CCNB1IP1
OS493_017015-T1ENDONUCLEASE DOMAIN-CONTAINING 1 PROTEIN ENDOD1
OS493_017016-T1BIFUNCTIONAL TH2 PROTEIN
OS493_017017-T1INTELECTIN
OS493_017019-T1PENTRAXIN
OS493_017020-T1B-CELL LYMPHOMA/LEUKEMIA 10
OS493_017021-T1NEGATIVE ELONGATION FACTOR E
OS493_017022-T1NUCLEOTIDE KINASE
OS493_017023-T1CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 77
OS493_017024-T1DC12-RELATED
OS493_017025-T1RIBOSOMAL PROTEIN S6 KINASE
OS493_017026-T1
OS493_017027-T1
OS493_017028-T1RIBONUCLEASE P SUBUNIT P30
OS493_017029-T1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
OS493_017030-T1MACROGLOBULIN / COMPLEMENT
OS493_017031-T1MACROGLOBULIN / COMPLEMENT
OS493_017032-T1MACROGLOBULIN / COMPLEMENT
OS493_017033-T1MACROGLOBULIN / COMPLEMENT
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