About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 305 306 307 308 309 310 311 312 313 314 Forward> Last>>        750 pages in total

Gene IDDescription
OS493_016714-T1BETA-HEXOSAMINIDASE
OS493_016715-T1ZINC-FINGER PROTEIN NOLZ1-RELATED
OS493_016716-T1WINGS APART-LIKE PROTEIN HOMOLOG
OS493_016717-T1DUF4605 DOMAIN-CONTAINING PROTEIN
OS493_016718-T1RAPSYN-RELATED
OS493_016719-T1SET DOMAIN-CONTAINING PROTEIN-RELATED
OS493_016720-T1SET DOMAIN-CONTAINING PROTEIN-RELATED
OS493_016721-T1ATP-BINDING CASSETTE SUB-FAMILY C
OS493_016722-T1
OS493_016723-T1LEUCINE-RICH MELANOCYTE DIFFERENTIATION-ASSOCIATED PROTEIN
OS493_016724-T1PROTEIN CBG03580
OS493_016725-T1
OS493_016726-T1AGAP005574-PA
OS493_016727-T1GATA-TYPE ZINC FINGER PROTEIN 1
OS493_016728-T1SOX TRANSCRIPTION FACTOR
OS493_016730-T1
OS493_016731-T1N-LYSINE METHYLTRANSFERASE KMT5A
OS493_016732-T1FI18025P1
OS493_016733-T1GATA-TYPE ZINC FINGER PROTEIN 1
OS493_016734-T1
OS493_016735-T1
OS493_016736-T1PATCHED-RELATED
OS493_016737-T1EGF-LIKE DOMAIN-CONTAINING PROTEIN
OS493_016738-T1TRANSMEMBRANE 9 SUPERFAMILY PROTEIN
OS493_016739-T1TRANSMEMBRANE 9 SUPERFAMILY PROTEIN
OS493_016741-T1EGF-LIKE DOMAIN-CONTAINING PROTEIN
OS493_016742-T1FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED
OS493_016743-T1
OS493_016744-T1
OS493_016747-T1
OS493_016748-T1
OS493_016749-T1
OS493_016750-T1SET DOMAIN-CONTAINING PROTEIN-RELATED
OS493_016751-T1
OS493_016752-T1C-TYPE LECTIN SUPERFAMILY MEMBER
OS493_016753-T1C-TYPE LECTIN SUPERFAMILY MEMBER
OS493_016754-T1ALPHA-MANNOSIDE BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE
OS493_016755-T1
OS493_016756-T1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
OS493_016757-T1
OS493_016758-T1
OS493_016759-T1
OS493_016760-T1
OS493_016761-T1
OS493_016762-T1
OS493_016763-T1TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)
OS493_016764-T1ZGC:162816-RELATED
OS493_016765-T1DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN
OS493_016766-T1DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN
OS493_016767-T1
TOP