About Trachythela sp. YZ-2020

Cold-water corals Trachythela sp. YZ-2020 are important habitats for creatures in the deep-sea environment, but they have been degraded by anthropogenic activity. They live in the cold, dark, and hypoxic deep-sea waters and are widespread around the world. Most of them must attach to hard-bottom substrates to grow, and only a few can live on soft sediments. Due to the lack of symbiotic zooxanthellae, they do not require sunlight as a source of energy, and their major source of nutrients is the microscopic zooplankton that comes from passing currents or descends from the surface of the ocean.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Trachythela sp. YZ-2020CnidariaTrachythela sp., Cold-water corals (CWCs)Cold seep/Hydrothermal vent~1068slope of the Xisha Trough (18°53′N, 112°66′E, July 2019) in the South China Sea (SCS)2770514

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
IDSSE_Tra_sp_1.0578.2MbContig2020JADLSH01Institute of Deep-Sea Science and Engineering,Chinese Academy of SciencesPRJNA66197590.70%35,305

References
TitleJournalPubmed ID
The First Draft Genome of a Cold-Water Coral Trachythela sp. (Alcyonacea: Stolonifera: Clavulariidae)Genome Biology and Evolution33331875

Gene Information

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Gene IDDescription
Clavulariidae_g23949REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g2395FORKHEAD BOX PROTEIN O
Clavulariidae_g23950REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g23951CXC DOMAIN-CONTAINING PROTEIN-RELATED
Clavulariidae_g23952PROTEIN CBG26694
Clavulariidae_g23953RETROTRANSPOSON
Clavulariidae_g23954RETROTRANSPOSON
Clavulariidae_g23955PHD-TYPE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g23956
Clavulariidae_g23957
Clavulariidae_g23958PROTEIN CBG26694
Clavulariidae_g23959SI:CH211-243P7.3-RELATED
Clavulariidae_g2396
Clavulariidae_g23960SI:CH211-243P7.3-RELATED
Clavulariidae_g23961
Clavulariidae_g23962
Clavulariidae_g23963
Clavulariidae_g23964
Clavulariidae_g23965
Clavulariidae_g23966
Clavulariidae_g23967
Clavulariidae_g23968
Clavulariidae_g23969
Clavulariidae_g2397SOLUTE CARRIER FAMILY 22 MEMBER 18
Clavulariidae_g23970
Clavulariidae_g23971
Clavulariidae_g23972
Clavulariidae_g23973
Clavulariidae_g23974
Clavulariidae_g23975
Clavulariidae_g23976
Clavulariidae_g23977
Clavulariidae_g23978
Clavulariidae_g23979
Clavulariidae_g2398PEROXISOMAL TARGETING SIGNAL 2 RECEPTOR
Clavulariidae_g23980
Clavulariidae_g23981
Clavulariidae_g23982
Clavulariidae_g23983
Clavulariidae_g23984
Clavulariidae_g23985
Clavulariidae_g23986
Clavulariidae_g23987
Clavulariidae_g23988
Clavulariidae_g23989
Clavulariidae_g2399DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
Clavulariidae_g23990
Clavulariidae_g23991
Clavulariidae_g23992
Clavulariidae_g23993
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