About Trachythela sp. YZ-2020

Cold-water corals Trachythela sp. YZ-2020 are important habitats for creatures in the deep-sea environment, but they have been degraded by anthropogenic activity. They live in the cold, dark, and hypoxic deep-sea waters and are widespread around the world. Most of them must attach to hard-bottom substrates to grow, and only a few can live on soft sediments. Due to the lack of symbiotic zooxanthellae, they do not require sunlight as a source of energy, and their major source of nutrients is the microscopic zooplankton that comes from passing currents or descends from the surface of the ocean.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Trachythela sp. YZ-2020CnidariaTrachythela sp., Cold-water corals (CWCs)Cold seep/Hydrothermal vent~1068slope of the Xisha Trough (18°53′N, 112°66′E, July 2019) in the South China Sea (SCS)2770514

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
IDSSE_Tra_sp_1.0578.2MbContig2020JADLSH01Institute of Deep-Sea Science and Engineering,Chinese Academy of SciencesPRJNA66197590.70%35,305

References
TitleJournalPubmed ID
The First Draft Genome of a Cold-Water Coral Trachythela sp. (Alcyonacea: Stolonifera: Clavulariidae)Genome Biology and Evolution33331875

Gene Information

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Gene IDDescription
Clavulariidae_g24038
Clavulariidae_g24039
Clavulariidae_g2404SERINE-THREONINE PROTEIN KINASE
Clavulariidae_g24040
Clavulariidae_g24041
Clavulariidae_g24042
Clavulariidae_g24043
Clavulariidae_g24044
Clavulariidae_g24045
Clavulariidae_g24046
Clavulariidae_g24047
Clavulariidae_g24048
Clavulariidae_g24049
Clavulariidae_g2405
Clavulariidae_g24050
Clavulariidae_g24051
Clavulariidae_g24052
Clavulariidae_g24053CXC DOMAIN-CONTAINING PROTEIN-RELATED
Clavulariidae_g24054
Clavulariidae_g24055
Clavulariidae_g24056
Clavulariidae_g24057
Clavulariidae_g24058
Clavulariidae_g24059
Clavulariidae_g2406MINA53 MYC INDUCED NUCLEAR ANTIGEN
Clavulariidae_g24060
Clavulariidae_g24061
Clavulariidae_g24062
Clavulariidae_g24063
Clavulariidae_g24064
Clavulariidae_g24065
Clavulariidae_g24066
Clavulariidae_g24067
Clavulariidae_g24068
Clavulariidae_g24069
Clavulariidae_g2407PROTEIN C21ORF59
Clavulariidae_g24070
Clavulariidae_g24071
Clavulariidae_g24072
Clavulariidae_g24073
Clavulariidae_g24074
Clavulariidae_g24075
Clavulariidae_g24076
Clavulariidae_g24077
Clavulariidae_g24078
Clavulariidae_g24079
Clavulariidae_g2408U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 14
Clavulariidae_g24080TRANSPOSABLE ELEMENT TC3 TRANSPOSASE-LIKE PROTEIN
Clavulariidae_g24081
Clavulariidae_g24082
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