About Trachythela sp. YZ-2020

Cold-water corals Trachythela sp. YZ-2020 are important habitats for creatures in the deep-sea environment, but they have been degraded by anthropogenic activity. They live in the cold, dark, and hypoxic deep-sea waters and are widespread around the world. Most of them must attach to hard-bottom substrates to grow, and only a few can live on soft sediments. Due to the lack of symbiotic zooxanthellae, they do not require sunlight as a source of energy, and their major source of nutrients is the microscopic zooplankton that comes from passing currents or descends from the surface of the ocean.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Trachythela sp. YZ-2020CnidariaTrachythela sp., Cold-water corals (CWCs)Cold seep/Hydrothermal vent~1068slope of the Xisha Trough (18°53′N, 112°66′E, July 2019) in the South China Sea (SCS)2770514

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
IDSSE_Tra_sp_1.0578.2MbContig2020JADLSH01Institute of Deep-Sea Science and Engineering,Chinese Academy of SciencesPRJNA66197590.70%35,305

References
TitleJournalPubmed ID
The First Draft Genome of a Cold-Water Coral Trachythela sp. (Alcyonacea: Stolonifera: Clavulariidae)Genome Biology and Evolution33331875

Gene Information

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Gene IDDescription
Clavulariidae_g24128
Clavulariidae_g24129
Clavulariidae_g2413
Clavulariidae_g24130
Clavulariidae_g24131
Clavulariidae_g24132
Clavulariidae_g24133
Clavulariidae_g24134
Clavulariidae_g24135
Clavulariidae_g24136
Clavulariidae_g24137
Clavulariidae_g24138
Clavulariidae_g24139
Clavulariidae_g2414SERINE-THREONINE PROTEIN KINASE
Clavulariidae_g24140
Clavulariidae_g24141
Clavulariidae_g24142
Clavulariidae_g24143
Clavulariidae_g24144
Clavulariidae_g24145
Clavulariidae_g24146
Clavulariidae_g24147
Clavulariidae_g24148
Clavulariidae_g24149
Clavulariidae_g2415SENTRIN-SPECIFIC PROTEASE
Clavulariidae_g24150
Clavulariidae_g24151
Clavulariidae_g24152
Clavulariidae_g24153
Clavulariidae_g24154
Clavulariidae_g24155
Clavulariidae_g24156
Clavulariidae_g24157
Clavulariidae_g24158
Clavulariidae_g24159
Clavulariidae_g2416TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 3
Clavulariidae_g24160
Clavulariidae_g24161
Clavulariidae_g24162
Clavulariidae_g24163
Clavulariidae_g24164
Clavulariidae_g24165
Clavulariidae_g24166
Clavulariidae_g24167
Clavulariidae_g24168
Clavulariidae_g24169
Clavulariidae_g2417TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12
Clavulariidae_g24170
Clavulariidae_g24171
Clavulariidae_g24172
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