About Trachythela sp. YZ-2020

Cold-water corals Trachythela sp. YZ-2020 are important habitats for creatures in the deep-sea environment, but they have been degraded by anthropogenic activity. They live in the cold, dark, and hypoxic deep-sea waters and are widespread around the world. Most of them must attach to hard-bottom substrates to grow, and only a few can live on soft sediments. Due to the lack of symbiotic zooxanthellae, they do not require sunlight as a source of energy, and their major source of nutrients is the microscopic zooplankton that comes from passing currents or descends from the surface of the ocean.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Trachythela sp. YZ-2020CnidariaTrachythela sp., Cold-water corals (CWCs)Cold seep/Hydrothermal vent~1068slope of the Xisha Trough (18°53′N, 112°66′E, July 2019) in the South China Sea (SCS)2770514

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
IDSSE_Tra_sp_1.0578.2MbContig2020JADLSH01Institute of Deep-Sea Science and Engineering,Chinese Academy of SciencesPRJNA66197590.70%35,305

References
TitleJournalPubmed ID
The First Draft Genome of a Cold-Water Coral Trachythela sp. (Alcyonacea: Stolonifera: Clavulariidae)Genome Biology and Evolution33331875

Gene Information

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Gene IDDescription
Clavulariidae_g24218
Clavulariidae_g24219
Clavulariidae_g2422
Clavulariidae_g24220
Clavulariidae_g24221
Clavulariidae_g24222
Clavulariidae_g24223
Clavulariidae_g24224
Clavulariidae_g24225
Clavulariidae_g24226
Clavulariidae_g24227
Clavulariidae_g24228
Clavulariidae_g24229
Clavulariidae_g2423PYRIDOXAL KINASE
Clavulariidae_g24230
Clavulariidae_g24231
Clavulariidae_g24232
Clavulariidae_g24233
Clavulariidae_g24234
Clavulariidae_g24235
Clavulariidae_g24236
Clavulariidae_g24237
Clavulariidae_g24238
Clavulariidae_g24239
Clavulariidae_g2424TRANSCRIPTION INITIATION FACTOR IIE, ALPHA SUBUNIT
Clavulariidae_g24240
Clavulariidae_g24241
Clavulariidae_g24242
Clavulariidae_g24243
Clavulariidae_g24244
Clavulariidae_g24245
Clavulariidae_g24246
Clavulariidae_g24247
Clavulariidae_g24248
Clavulariidae_g24249
Clavulariidae_g2425DRAB5-RELATED
Clavulariidae_g24250
Clavulariidae_g24251
Clavulariidae_g24252
Clavulariidae_g24253
Clavulariidae_g24254
Clavulariidae_g24255
Clavulariidae_g24256
Clavulariidae_g24257
Clavulariidae_g24258
Clavulariidae_g24259
Clavulariidae_g2426
Clavulariidae_g24260
Clavulariidae_g24261
Clavulariidae_g24262
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