About Trachythela sp. YZ-2020

Cold-water corals Trachythela sp. YZ-2020 are important habitats for creatures in the deep-sea environment, but they have been degraded by anthropogenic activity. They live in the cold, dark, and hypoxic deep-sea waters and are widespread around the world. Most of them must attach to hard-bottom substrates to grow, and only a few can live on soft sediments. Due to the lack of symbiotic zooxanthellae, they do not require sunlight as a source of energy, and their major source of nutrients is the microscopic zooplankton that comes from passing currents or descends from the surface of the ocean.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Trachythela sp. YZ-2020CnidariaTrachythela sp., Cold-water corals (CWCs)Cold seep/Hydrothermal vent~1068slope of the Xisha Trough (18°53′N, 112°66′E, July 2019) in the South China Sea (SCS)2770514

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
IDSSE_Tra_sp_1.0578.2MbContig2020JADLSH01Institute of Deep-Sea Science and Engineering,Chinese Academy of SciencesPRJNA66197590.70%35,305

References
TitleJournalPubmed ID
The First Draft Genome of a Cold-Water Coral Trachythela sp. (Alcyonacea: Stolonifera: Clavulariidae)Genome Biology and Evolution33331875

Gene Information

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Gene IDDescription
Clavulariidae_g24353
Clavulariidae_g24354
Clavulariidae_g24355
Clavulariidae_g24356
Clavulariidae_g24357
Clavulariidae_g24358
Clavulariidae_g24359
Clavulariidae_g2436CHLORIDE INTRACELLULAR CHANNEL, ISOFORM A
Clavulariidae_g24360
Clavulariidae_g24361
Clavulariidae_g24362
Clavulariidae_g24363
Clavulariidae_g24364
Clavulariidae_g24365
Clavulariidae_g24366
Clavulariidae_g24367
Clavulariidae_g24368
Clavulariidae_g24369
Clavulariidae_g2437DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
Clavulariidae_g24370
Clavulariidae_g24371
Clavulariidae_g24372
Clavulariidae_g24373
Clavulariidae_g24374
Clavulariidae_g24375
Clavulariidae_g24376
Clavulariidae_g24377
Clavulariidae_g24378
Clavulariidae_g24379
Clavulariidae_g2438SODIUM/NUCLEOSIDE COTRANSPORTER
Clavulariidae_g24380
Clavulariidae_g24381
Clavulariidae_g24382
Clavulariidae_g24383
Clavulariidae_g24384
Clavulariidae_g24385
Clavulariidae_g24386
Clavulariidae_g24387
Clavulariidae_g24388
Clavulariidae_g24389
Clavulariidae_g2439ATPASE N2B
Clavulariidae_g24390
Clavulariidae_g24391
Clavulariidae_g24392
Clavulariidae_g24393
Clavulariidae_g24394
Clavulariidae_g24395
Clavulariidae_g24396
Clavulariidae_g24397
Clavulariidae_g24398
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