About Trachythela sp. YZ-2020

Cold-water corals Trachythela sp. YZ-2020 are important habitats for creatures in the deep-sea environment, but they have been degraded by anthropogenic activity. They live in the cold, dark, and hypoxic deep-sea waters and are widespread around the world. Most of them must attach to hard-bottom substrates to grow, and only a few can live on soft sediments. Due to the lack of symbiotic zooxanthellae, they do not require sunlight as a source of energy, and their major source of nutrients is the microscopic zooplankton that comes from passing currents or descends from the surface of the ocean.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Trachythela sp. YZ-2020CnidariaTrachythela sp., Cold-water corals (CWCs)Cold seep/Hydrothermal vent~1068slope of the Xisha Trough (18°53′N, 112°66′E, July 2019) in the South China Sea (SCS)2770514

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
IDSSE_Tra_sp_1.0578.2MbContig2020JADLSH01Institute of Deep-Sea Science and Engineering,Chinese Academy of SciencesPRJNA66197590.70%35,305

References
TitleJournalPubmed ID
The First Draft Genome of a Cold-Water Coral Trachythela sp. (Alcyonacea: Stolonifera: Clavulariidae)Genome Biology and Evolution33331875

Gene Information

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Gene IDDescription
Clavulariidae_g24443
Clavulariidae_g24444
Clavulariidae_g24445
Clavulariidae_g24446
Clavulariidae_g24447
Clavulariidae_g24448
Clavulariidae_g24449
Clavulariidae_g2445PRE-MRNA-PROCESSING FACTOR 17
Clavulariidae_g24450
Clavulariidae_g24451
Clavulariidae_g24452
Clavulariidae_g24453
Clavulariidae_g24454
Clavulariidae_g24455
Clavulariidae_g24456
Clavulariidae_g24457
Clavulariidae_g24458
Clavulariidae_g24459
Clavulariidae_g2446PARKIN COREGULATED GENE PROTEIN PARK2 COREGULATED
Clavulariidae_g24460
Clavulariidae_g24461
Clavulariidae_g24462
Clavulariidae_g24463
Clavulariidae_g24464
Clavulariidae_g24465
Clavulariidae_g24466
Clavulariidae_g24467
Clavulariidae_g24468
Clavulariidae_g24469
Clavulariidae_g2447ATP-BINDING CASSETTE SUB-FAMILY B
Clavulariidae_g24470
Clavulariidae_g24471
Clavulariidae_g24472
Clavulariidae_g24473
Clavulariidae_g24474
Clavulariidae_g24475
Clavulariidae_g24476
Clavulariidae_g24477
Clavulariidae_g24478
Clavulariidae_g24479
Clavulariidae_g2448ORGANIC ANION TRANSPORTER
Clavulariidae_g24480
Clavulariidae_g24481
Clavulariidae_g24482
Clavulariidae_g24483
Clavulariidae_g24484
Clavulariidae_g24485
Clavulariidae_g24486
Clavulariidae_g24487
Clavulariidae_g24488
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