About Trachythela sp. YZ-2020

Cold-water corals Trachythela sp. YZ-2020 are important habitats for creatures in the deep-sea environment, but they have been degraded by anthropogenic activity. They live in the cold, dark, and hypoxic deep-sea waters and are widespread around the world. Most of them must attach to hard-bottom substrates to grow, and only a few can live on soft sediments. Due to the lack of symbiotic zooxanthellae, they do not require sunlight as a source of energy, and their major source of nutrients is the microscopic zooplankton that comes from passing currents or descends from the surface of the ocean.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Trachythela sp. YZ-2020CnidariaTrachythela sp., Cold-water corals (CWCs)Cold seep/Hydrothermal vent~1068slope of the Xisha Trough (18°53′N, 112°66′E, July 2019) in the South China Sea (SCS)2770514

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
IDSSE_Tra_sp_1.0578.2MbContig2020JADLSH01Institute of Deep-Sea Science and Engineering,Chinese Academy of SciencesPRJNA66197590.70%35,305

References
TitleJournalPubmed ID
The First Draft Genome of a Cold-Water Coral Trachythela sp. (Alcyonacea: Stolonifera: Clavulariidae)Genome Biology and Evolution33331875

Gene Information

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Gene IDDescription
Clavulariidae_g24533
Clavulariidae_g24534
Clavulariidae_g24535
Clavulariidae_g24536
Clavulariidae_g24537
Clavulariidae_g24538
Clavulariidae_g24539
Clavulariidae_g2454NADPH OXIDASE
Clavulariidae_g24540
Clavulariidae_g24541
Clavulariidae_g24542
Clavulariidae_g24543
Clavulariidae_g24544
Clavulariidae_g24545
Clavulariidae_g24546
Clavulariidae_g24547
Clavulariidae_g24548
Clavulariidae_g24549
Clavulariidae_g2455RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATED
Clavulariidae_g24550
Clavulariidae_g24551
Clavulariidae_g24552
Clavulariidae_g24553
Clavulariidae_g24554
Clavulariidae_g24555
Clavulariidae_g24556
Clavulariidae_g24557
Clavulariidae_g24558
Clavulariidae_g24559
Clavulariidae_g2456NADPH OXIDASE
Clavulariidae_g24560
Clavulariidae_g24561
Clavulariidae_g24562
Clavulariidae_g24563
Clavulariidae_g24564
Clavulariidae_g24565
Clavulariidae_g24566
Clavulariidae_g24567
Clavulariidae_g24568
Clavulariidae_g24569
Clavulariidae_g2457CALCITONIN GENE-RELATED PEPTIDE-RECEPTOR COMPONENT PROTEIN
Clavulariidae_g24570
Clavulariidae_g24571
Clavulariidae_g24572
Clavulariidae_g24573
Clavulariidae_g24574
Clavulariidae_g24575
Clavulariidae_g24576
Clavulariidae_g24577
Clavulariidae_g24578
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