About Trachythela sp. YZ-2020

Cold-water corals Trachythela sp. YZ-2020 are important habitats for creatures in the deep-sea environment, but they have been degraded by anthropogenic activity. They live in the cold, dark, and hypoxic deep-sea waters and are widespread around the world. Most of them must attach to hard-bottom substrates to grow, and only a few can live on soft sediments. Due to the lack of symbiotic zooxanthellae, they do not require sunlight as a source of energy, and their major source of nutrients is the microscopic zooplankton that comes from passing currents or descends from the surface of the ocean.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Trachythela sp. YZ-2020CnidariaTrachythela sp., Cold-water corals (CWCs)Cold seep/Hydrothermal vent~1068slope of the Xisha Trough (18°53′N, 112°66′E, July 2019) in the South China Sea (SCS)2770514

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
IDSSE_Tra_sp_1.0578.2MbContig2020JADLSH01Institute of Deep-Sea Science and Engineering,Chinese Academy of SciencesPRJNA66197590.70%35,305

References
TitleJournalPubmed ID
The First Draft Genome of a Cold-Water Coral Trachythela sp. (Alcyonacea: Stolonifera: Clavulariidae)Genome Biology and Evolution33331875

Gene Information

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Gene IDDescription
Clavulariidae_g24669
Clavulariidae_g2467
Clavulariidae_g24670
Clavulariidae_g24671
Clavulariidae_g24672
Clavulariidae_g24673
Clavulariidae_g24674
Clavulariidae_g24675
Clavulariidae_g24676
Clavulariidae_g24677
Clavulariidae_g24678
Clavulariidae_g24679
Clavulariidae_g2468
Clavulariidae_g24680
Clavulariidae_g24681
Clavulariidae_g24682
Clavulariidae_g24683
Clavulariidae_g24684
Clavulariidae_g24685
Clavulariidae_g24686
Clavulariidae_g24687
Clavulariidae_g24688
Clavulariidae_g24689
Clavulariidae_g2469DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN
Clavulariidae_g24690
Clavulariidae_g24691
Clavulariidae_g24692
Clavulariidae_g24693
Clavulariidae_g24694
Clavulariidae_g24695
Clavulariidae_g24696
Clavulariidae_g24697
Clavulariidae_g24698
Clavulariidae_g24699
Clavulariidae_g247
Clavulariidae_g2470SOX TRANSCRIPTION FACTOR
Clavulariidae_g24700
Clavulariidae_g24701
Clavulariidae_g24702
Clavulariidae_g24703
Clavulariidae_g24704
Clavulariidae_g24705
Clavulariidae_g24706
Clavulariidae_g24707
Clavulariidae_g24708
Clavulariidae_g24709
Clavulariidae_g2471PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Clavulariidae_g24710
Clavulariidae_g24711
Clavulariidae_g24712
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