About Trachythela sp. YZ-2020

Cold-water corals Trachythela sp. YZ-2020 are important habitats for creatures in the deep-sea environment, but they have been degraded by anthropogenic activity. They live in the cold, dark, and hypoxic deep-sea waters and are widespread around the world. Most of them must attach to hard-bottom substrates to grow, and only a few can live on soft sediments. Due to the lack of symbiotic zooxanthellae, they do not require sunlight as a source of energy, and their major source of nutrients is the microscopic zooplankton that comes from passing currents or descends from the surface of the ocean.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Trachythela sp. YZ-2020CnidariaTrachythela sp., Cold-water corals (CWCs)Cold seep/Hydrothermal vent~1068slope of the Xisha Trough (18°53′N, 112°66′E, July 2019) in the South China Sea (SCS)2770514

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
IDSSE_Tra_sp_1.0578.2MbContig2020JADLSH01Institute of Deep-Sea Science and Engineering,Chinese Academy of SciencesPRJNA66197590.70%35,305

References
TitleJournalPubmed ID
The First Draft Genome of a Cold-Water Coral Trachythela sp. (Alcyonacea: Stolonifera: Clavulariidae)Genome Biology and Evolution33331875

Gene Information

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Gene IDDescription
Clavulariidae_g24713
Clavulariidae_g24714
Clavulariidae_g24715
Clavulariidae_g24716
Clavulariidae_g24717
Clavulariidae_g24718
Clavulariidae_g24719
Clavulariidae_g2472TRNA PSEUDOURIDINE SYNTHASE D
Clavulariidae_g24720
Clavulariidae_g24721
Clavulariidae_g24722
Clavulariidae_g24723
Clavulariidae_g24724
Clavulariidae_g24725
Clavulariidae_g24726
Clavulariidae_g24727
Clavulariidae_g24728
Clavulariidae_g24729
Clavulariidae_g2473TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL PROTEIN PAINLESS
Clavulariidae_g24730
Clavulariidae_g24731
Clavulariidae_g24732
Clavulariidae_g24733
Clavulariidae_g24734
Clavulariidae_g24735
Clavulariidae_g24736
Clavulariidae_g24737
Clavulariidae_g24738
Clavulariidae_g24739
Clavulariidae_g2474UBIQUITIN-PROTEIN LIGASE E3A-RELATED
Clavulariidae_g24740
Clavulariidae_g24741
Clavulariidae_g24742
Clavulariidae_g24743
Clavulariidae_g24744
Clavulariidae_g24745
Clavulariidae_g24746
Clavulariidae_g24747
Clavulariidae_g24748
Clavulariidae_g24749
Clavulariidae_g2475ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIAL
Clavulariidae_g24750
Clavulariidae_g24751
Clavulariidae_g24752
Clavulariidae_g24753
Clavulariidae_g24754
Clavulariidae_g24755
Clavulariidae_g24756
Clavulariidae_g24757
Clavulariidae_g24758
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