About Trachythela sp. YZ-2020

Cold-water corals Trachythela sp. YZ-2020 are important habitats for creatures in the deep-sea environment, but they have been degraded by anthropogenic activity. They live in the cold, dark, and hypoxic deep-sea waters and are widespread around the world. Most of them must attach to hard-bottom substrates to grow, and only a few can live on soft sediments. Due to the lack of symbiotic zooxanthellae, they do not require sunlight as a source of energy, and their major source of nutrients is the microscopic zooplankton that comes from passing currents or descends from the surface of the ocean.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Trachythela sp. YZ-2020CnidariaTrachythela sp., Cold-water corals (CWCs)Cold seep/Hydrothermal vent~1068slope of the Xisha Trough (18°53′N, 112°66′E, July 2019) in the South China Sea (SCS)2770514

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
IDSSE_Tra_sp_1.0578.2MbContig2020JADLSH01Institute of Deep-Sea Science and Engineering,Chinese Academy of SciencesPRJNA66197590.70%35,305

References
TitleJournalPubmed ID
The First Draft Genome of a Cold-Water Coral Trachythela sp. (Alcyonacea: Stolonifera: Clavulariidae)Genome Biology and Evolution33331875

Gene Information

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Gene IDDescription
Clavulariidae_g24759
Clavulariidae_g2476ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN
Clavulariidae_g24760
Clavulariidae_g24761
Clavulariidae_g24762
Clavulariidae_g24763
Clavulariidae_g24764
Clavulariidae_g24765
Clavulariidae_g24766
Clavulariidae_g24767
Clavulariidae_g24768
Clavulariidae_g24769
Clavulariidae_g2477D-2-HYDROXYGLUTARATE DEHYDROGENASE, MITOCHONDRIAL
Clavulariidae_g24770
Clavulariidae_g24771
Clavulariidae_g24772
Clavulariidae_g24773
Clavulariidae_g24774
Clavulariidae_g24775
Clavulariidae_g24776
Clavulariidae_g24777
Clavulariidae_g24778
Clavulariidae_g24779
Clavulariidae_g2478
Clavulariidae_g24780
Clavulariidae_g24781
Clavulariidae_g24782
Clavulariidae_g24783
Clavulariidae_g24784
Clavulariidae_g24785
Clavulariidae_g24786
Clavulariidae_g24787
Clavulariidae_g24788
Clavulariidae_g24789
Clavulariidae_g2479AATF PROTEIN APOPTOSIS ANTAGONIZING TRANSCRIPTION FACTOR
Clavulariidae_g24790
Clavulariidae_g24791
Clavulariidae_g24792
Clavulariidae_g24793
Clavulariidae_g24794
Clavulariidae_g24795
Clavulariidae_g24796
Clavulariidae_g24797
Clavulariidae_g24798
Clavulariidae_g24799
Clavulariidae_g248
Clavulariidae_g2480HOMOGENTISATE 1,2-DIOXYGENASE
Clavulariidae_g24800
Clavulariidae_g24801
Clavulariidae_g24802
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