About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 291 292 293 294 295 296 297 298 299 300 Forward> Last>>        750 pages in total

Gene IDDescription
OS493_015961-T1SOLUTE CARRIER FAMILY 22 MEMBER
OS493_015962-T1COLLAGEN ALPHA
OS493_015963-T1COLLAGEN ALPHA
OS493_015964-T1
OS493_015965-T1COLLAGEN ALPHA
OS493_015966-T1
OS493_015967-T1SOLUTE CARRIER FAMILY 22 MEMBER
OS493_015968-T1SOLUTE CARRIER FAMILY 22 MEMBER
OS493_015969-T1SOLUTE CARRIER FAMILY 22 MEMBER
OS493_015970-T1SOLUTE CARRIER FAMILY 22 MEMBER
OS493_015971-T1TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA
OS493_015972-T1SOLUTE CARRIER FAMILY 22 MEMBER
OS493_015973-T1SOLUTE CARRIER FAMILY 22 MEMBER
OS493_015974-T1UNC-93 RELATED
OS493_015975-T1
OS493_015976-T1SH3 MULTIPLE DOMAIN
OS493_015977-T1SH3 MULTIPLE DOMAIN
OS493_015978-T1SMALL NUCLEAR RIBONUCLEOPROTEIN SM
OS493_015979-T1GUANYLYL CYCLASE DOMAIN CONTAINING PROTEIN 1 GUCD1
OS493_015980-T1MALATE SYNTHASE
OS493_015981-T1ISOCITRATE LYASE/MALATE SYNTHASE
OS493_015982-T1YDJC DEACETYLASE FAMILY MEMBER
OS493_015983-T1YDJC DEACETYLASE FAMILY MEMBER
OS493_015984-T1GPI TRANSAMIDASE COMPONENT PIG-S
OS493_015985-T1
OS493_015986-T1APOPTOSIS-INDUCING FACTOR 1
OS493_015987-T1OBG GTPASE FAMILY
OS493_015988-T1BIFUNCTIONAL POLYNUCLEOTIDE PHOSPHATASE/KINASE
OS493_015989-T1
OS493_015990-T1RNA-BINDING MOTIF PROTEIN 14B
OS493_015991-T1EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G
OS493_015992-T1LIM/HOMEOBOX PROTEIN LHX
OS493_015993-T1
OS493_015994-T1
OS493_015995-T1ANKYRIN REPEAT AND LEM DOMAIN-CONTAINING PROTEIN 2
OS493_015997-T1CALCITONIN GENE-RELATED PEPTIDE-RECEPTOR COMPONENT PROTEIN
OS493_015998-T1
OS493_015999-T1COILED-COIL DOMAIN-CONTAINING PROTEIN 157
OS493_016000-T12-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2
OS493_016001-T1CHOLOYLGLYCINE HYDROLASE
OS493_016002-T1CHOLOYLGLYCINE HYDROLASE
OS493_016003-T1SERINE PROTEASE
OS493_016004-T1COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN CONTAINING 2/NUR77
OS493_016005-T1LEUCINE RICH REPEAT FAMILY PROTEIN
OS493_016006-T1EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 12
OS493_016007-T1UNCHARACTERIZED
OS493_016008-T1GPI TRANSAMIDASE COMPONENT PIG-S
OS493_016009-T1APOPTOSIS-INDUCING FACTOR 1
OS493_016010-T1APOPTOSIS-INDUCING FACTOR 1
OS493_016012-T1PROTEIN DISPATCHED-RELATED
TOP