About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides61135-
Paelopatides61136GALACTOSE-3-O-SULFOTRANSFERASE
Paelopatides61137CS DOMAIN-CONTAINING PROTEIN
Paelopatides61138CS DOMAIN-CONTAINING PROTEIN
Paelopatides61139-
Paelopatides61140BAND 7 PROTEIN-RELATED
Paelopatides61141-
Paelopatides61142-
Paelopatides61143HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN 66
Paelopatides61144-
Paelopatides61145HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN 66
Paelopatides61146-
Paelopatides61147ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides61148-
Paelopatides61149AAA DOMAIN-CONTAINING
Paelopatides61150ALCOHOL DEHYDROGENASE
Paelopatides6115115-HYDROXYPROSTAGLANDIN DEHYDROGENASE [NAD(+)]
Paelopatides61152MULTICOPPER OXIDASE-RELATED
Paelopatides61153ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides61154ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
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