About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides60224UNCHARACTERIZED
Paelopatides60225PROTEIN CBG26694
Paelopatides60226-
Paelopatides60227-
Paelopatides60228NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides60229FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides60230ENDONUCLEASE
Paelopatides60231TRYPSIN-RELATED
Paelopatides60232-
Paelopatides60233-
Paelopatides60234-
Paelopatides60236NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides60237TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides60238FI04643P-RELATED
Paelopatides60239SERINE/THREONINE-PROTEIN KINASE
Paelopatides60240RIBOSOMAL PROTEIN S6 KINASE
Paelopatides60241REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides60242MACOILIN
Paelopatides60243MACOILIN
Paelopatides60244ZINC FINGER PROTEIN
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