About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides60204-
Paelopatides60205-
Paelopatides60206EGALITARIAN, ISOFORM B
Paelopatides6020752 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides60208-
Paelopatides60209-
Paelopatides60210HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides60211-
Paelopatides60212PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides60213-
Paelopatides60214ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4
Paelopatides60215RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides60216-
Paelopatides60217RETROTRANSPOSON
Paelopatides60218PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides60219-
Paelopatides60220FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides60221MICROSOMAL SIGNAL PEPTIDASE 25 KDA SUBUNIT
Paelopatides60222-
Paelopatides60223ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4
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