About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides60164-
Paelopatides60165FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides60166PROTEIN CBG20422
Paelopatides60167SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides60168PROTEIN CBG26694
Paelopatides60169EPM2A-INTERACTING PROTEIN 1
Paelopatides60170-
Paelopatides60171PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides60172FORKHEAD BOX PROTEIN
Paelopatides60173PR DOMAIN ZINC FINGER PROTEIN
Paelopatides60174PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides60175-
Paelopatides60176REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides60177-
Paelopatides60178-
Paelopatides60179REVERSE TRANSCRIPTASE
Paelopatides60180-
Paelopatides60181REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides60182-
Paelopatides60183-
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