About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides60144POL PROTEIN
Paelopatides60145-
Paelopatides60146TUBERIN
Paelopatides60147CADHERIN-87A
Paelopatides60148-
Paelopatides60149PROTEIN CBG26694
Paelopatides60150-
Paelopatides60151CARBOHYDRATE SULFOTRANSFERASE
Paelopatides60152-
Paelopatides60153-
Paelopatides60154PROTEIN, PUTATIVE-RELATED
Paelopatides60155-
Paelopatides60156-
Paelopatides60157-
Paelopatides60158ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides60159SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides60160PROTEIN CBG26694
Paelopatides60161-
Paelopatides60162ENDONUCLEASE
Paelopatides60163-
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