About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides05594NEUROTRANSMITTER GATED ION CHANNEL
Paelopatides05595PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Paelopatides05596PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Paelopatides05597-
Paelopatides05598TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
Paelopatides055998-OXO-DGTP DIPHOSPHATES NUDT15
Paelopatides05600REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides05601REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides05602-
Paelopatides05603REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides05604-
Paelopatides05605SLIT AND NTRK-LIKE PROTEIN 4-RELATED
Paelopatides05606-
Paelopatides05607FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides05608-
Paelopatides05609-
Paelopatides05610DYNEIN INTERMEDIATE CHAIN
Paelopatides05611-
Paelopatides05612-
Paelopatides05613PROTEIN CBG26694
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